AMCG00004545


Basic Information

Item Value
gene id AMCG00004545
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53187590 ~ 53192191 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004545
GACACATTGTTGCCCCGCACAGTCCCGGGCAGGACCCCCCAGCGCTGTGCGTGAAGAGACCCCCGCACACACGTCCTCTGCGGCCCGTAAAGACACGCAAGTGCTAAAGGTCCATCATCAGATCCTCAGAGGGAGAATGGACACTTTGCAACGCATCCAGAGCCGCAGTTACAAAGTCACTGCAGGAAACAGAAAGGGAAAATCCTACCGGAGCAGCGGACACGACGCGGCCACGATTTGATCCCACACTCGCCTTGAGTCGGGGACTGTAGTCGCCTCTGGAGGAGCTGCGGGCACAGGCGGGCACAGGCGGGCACAGGCGGGCACAGGCGGGCACAGGCGCAGCTGCTGCCACTCACGGCCCACGCACGGCTCCACTCCGGAAAGCTGCAGGGGAGCACGGCGGGGGCGGGGCACGAAGACGGACACACGCTCTGGCCAATGGGACCCAGTTGAAGATGTCCGGATCGTTGTctcggctgctgctgctgctggtgctgtgCTCCCTGCACCCCCCGCGGGCCCAGGCGGGCAGGCAGATGCCCAAATTGTCCAACAAGAAGCTGTGCGCTGACGAGGAGTGCAGCAACCCCATCCTGATCGCCCGGGCACTGGTGGACTACTATCCACAGGACTGCCGCTTCATCCCCCTGCGCCAGGGCCAGCGCATCTACGTATACGCCATGCTGAAGGACCACGGCAACCTCTTCTGGATGGGCAGCGCGGAGAATGGCGACCAAGAGGCGCGGCTGGGCCACTTCCCCAGCAGCTCGGTGGAGGAGATGCACCCTCTGATGCCGGCCTCCGTGGAAGTCAAGACAGACAGATGGGACTTCTACTGCCACTGAGACGGTCCATTCCGGCCGCAGTCTCCTGTCCCCGTCTCCGCCTGTCACTGGATACTAGGGCTCTGAGCATCCAAAACACTTAGCAAACAAGATGCACAGCGTCTGACTAACTGCTCTGGCTACAAGGGTCTGATCAGCAGCTGGGACCCGAGATAGACAGATTTAGAGAGAGGCTACTCCAGTTAGGAAGACAGTTTTCCTTCACACACATTCCCACCTAGTGTAATCTCAAGCAAAGGCAGCGAAATGAAGGGCCAGGATTAAAACTAAGACAATAGCGAACAAACCACAGAATAATCCAGCTACACTAGGCCCTTTTATAGTCAAAAGCATTCAACTACATGAGTCTTAATAAGTTGTAGTGTGTTATAGCAATAGCAACACAGGCGGGGTGGGCCTCCGGCTGgctgcagtgctgtgtctgtgtgtcagacaGGTTGTTCTGGTCTGTGAGCAGGAAGCCCCTGGCGATCGCTATGGGATTCATCATTAAGGTTTCTGTTTGCACCACGGGATTGAAAAGAATGCCTGCTTGTAATTCCTTAGCtgatgtatttccttttttttttcttgctacaCCTTTCAGGTATGCTGTGTAATCATGATTAAAGAGCAACCAAGAcgtttcatattgttttttctagtttatttcctGTTCTGTCATCTCCT

Function

GO: NA

KEGG:

id description
K16655 MIA; melanoma inhibitory activity protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004545 True 1517 mRNA 0.56 5 53187590 53192191

Neighbor

gene id symbol gene type direction distance location
AMCG00004542 NA coding upstream 84969 53076079 ~ 53102621 (+)
AMCG00004543 NA coding upstream 128836 53045999 ~ 53058754 (+)
AMCG00004536 NA coding upstream 144369 53034664 ~ 53043221 (+)
AMCG00004537 NA coding upstream 154334 53018982 ~ 53033256 (+)
AMCG00004541 NA coding upstream 173245 53011189 ~ 53014345 (+)
AMCG00004548 NA coding downstream 1472 53193663 ~ 53195262 (+)
AMCG00004547 hspb2 coding downstream 14232 53206423 ~ 53210773 (+)
AMCG00004549 NA coding downstream 41600 53233791 ~ 53244730 (+)
AMCG00004554 dlat,LOC106563967 coding downstream 81509 53273700 ~ 53283989 (+)
AMCG00004555 NA coding downstream 100912 53293103 ~ 53295211 (+)
G9000 NA non-coding upstream 41796 53145595 ~ 53145794 (+)
G8987 NA non-coding upstream 67894 53117197 ~ 53119696 (+)
G8982 NA non-coding upstream 80593 53106744 ~ 53106997 (+)
G8900 NA non-coding upstream 284808 52839448 ~ 52902782 (+)
G8836 NA non-coding upstream 565324 52619475 ~ 52622266 (+)
G9043 NA non-coding downstream 107472 53299663 ~ 53299872 (+)
G9160 NA non-coding downstream 672749 53864940 ~ 53866447 (+)
G9170 NA non-coding downstream 740978 53933169 ~ 53981983 (+)
G9191 NA non-coding downstream 820635 54012826 ~ 54013029 (+)
G9243 NA non-coding downstream 1012030 54204221 ~ 54204990 (+)
G9012 NA other upstream 3607 53183394 ~ 53183983 (+)
AMCG00004509 NA other upstream 1173960 51989353 ~ 52013630 (+)
AMCG00004501 NA other upstream 1240772 51939549 ~ 51946818 (+)
G8606 NA other upstream 2072328 51114941 ~ 51115262 (+)
AMCG00004477 NA other upstream 2434158 50741388 ~ 50753432 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 66988 53259179 ~ 53270254 (+)
G9118 NA other downstream 411570 53603761 ~ 53607898 (+)
AMCG00004563 NA other downstream 443848 53636039 ~ 53670522 (+)
G9128 NA other downstream 455820 53648011 ~ 53843859 (+)
G9129 NA other downstream 485373 53677564 ~ 53861528 (+)

Expression


Co-expression Network