AMCG00004541


Basic Information

Item Value
gene id AMCG00004541
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53011189 ~ 53014345 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004541
ATGGGCTGTCTGGACAAAGGGAGCCGTATTGTTCCCACTACCTGCCGTGGAGAGGGAGGAGCTGCTGTCCTGTCACTTATCCCAGAAGCTACAAGTCCAGACATGACCCAGAGAAAAAGCAAGCGTCTTTTCACAAACACGGTTTCTCTGGAAACCCCAGGTCAACACGGGCACTGGCCATCCGCAGGCACTGCCTCCCTCTCCGTTCGTAATGACAGCTTCCAGAAACGATACTACACCCTGGTGACTTCAGCGTACCGGCAAATAGGAAGTGGAGAAGTGGCGCTCAATCGCAGCCCGCGGGAGGCCGTGTTGGCGCTGTCCCGCAGCCCGCTCGTCGTGGCGCTATATTTGAAAAGCTGTTGGGATGCGACGCGCCTGCGCCCTATAAAGCCTGCGGCTGTGTGCGGGACTCAGGGGAGCCGGGCCGAGGGGTCCCTGCAGACGCGCAGACGCGCAGACGCGCAGACGCACCGGCGCTGGGTAAGTGCTTCAGTGTGTGTGGACACAGGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004541 True 516 mRNA 0.60 3 53011189 53014345

Neighbor

gene id symbol gene type direction distance location
AMCG00004538 NA coding upstream 25839 52965214 ~ 52985350 (+)
AMCG00004535 NA coding upstream 94888 52915648 ~ 52916301 (+)
AMCG00004531 timm8b,LOC107598437,LOC107717885 coding upstream 98605 52912010 ~ 52912584 (+)
AMCG00004530 NA coding upstream 115786 52883208 ~ 52895403 (+)
AMCG00004527 NA coding upstream 166371 52831176 ~ 52844818 (+)
AMCG00004537 NA coding downstream 4637 53018982 ~ 53033256 (+)
AMCG00004536 NA coding downstream 20319 53034664 ~ 53043221 (+)
AMCG00004543 NA coding downstream 31654 53045999 ~ 53058754 (+)
AMCG00004542 NA coding downstream 61734 53076079 ~ 53102621 (+)
AMCG00004545 NA coding downstream 173245 53187590 ~ 53192191 (+)
G8900 NA non-coding upstream 108407 52839448 ~ 52902782 (+)
G8836 NA non-coding upstream 388923 52619475 ~ 52622266 (+)
G8835 NA non-coding upstream 394337 52616536 ~ 52616852 (+)
G8817 NA non-coding upstream 456810 52553921 ~ 52554379 (+)
G8816 NA non-coding upstream 478171 52532729 ~ 52533018 (+)
G8982 NA non-coding downstream 92399 53106744 ~ 53106997 (+)
G8987 NA non-coding downstream 102852 53117197 ~ 53119696 (+)
G9000 NA non-coding downstream 131250 53145595 ~ 53145794 (+)
G9043 NA non-coding downstream 285318 53299663 ~ 53299872 (+)
G9160 NA non-coding downstream 850595 53864940 ~ 53866447 (+)
AMCG00004509 NA other upstream 997559 51989353 ~ 52013630 (+)
AMCG00004501 NA other upstream 1064371 51939549 ~ 51946818 (+)
G8606 NA other upstream 1895927 51114941 ~ 51115262 (+)
AMCG00004477 NA other upstream 2257757 50741388 ~ 50753432 (+)
AMCG00004463 NA other upstream 2768146 50236677 ~ 50243043 (+)
G9012 NA other downstream 169049 53183394 ~ 53183983 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 244834 53259179 ~ 53270254 (+)
G9118 NA other downstream 589416 53603761 ~ 53607898 (+)
AMCG00004563 NA other downstream 621694 53636039 ~ 53670522 (+)
G9128 NA other downstream 633666 53648011 ~ 53843859 (+)

Expression


Co-expression Network