AMCG00004549


Basic Information

Item Value
gene id AMCG00004549
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53233791 ~ 53244730 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004549
ATGATCGCATCCCTGTCGAGAGGAAATCTGCTCGATGTGCTTCAGGAGGGCTTCAACCAGGTAACTTCACCAGAGCCCGCTGTGGGGCTGCTGGGGACCGCGATGCGCAcggctgtgctgtgctgCGAGACGCACGGCTCCCTGAGGTGGGGCCTTCACCGCAGAAATGACATTTACCAAAGCGGAGACTTTCGGATTGGGAAGAGTGTGCACGAAGAGTTGGGGTTGGCTTTGTGGGGAGTGGATTACAGCATCGCCCCCATTAAAGAGGCCGGGTCCAGGTCTCCCATGTCAGATGCGATGAATCGGGAAGCTGGATGTGTTTGCGGGACTCCCCAGTGCACCTTCCCCCAGAGTGTTAATACTGCAGCACTGCTGAgtctgaaaaaagaaagaaaggctgAATCTTTGAAGTCCAACACGCTGCGCTGTACAACAGGGCCCCGATTCACTGCTCCGGACACGCAAGAGCGGCTCCGTGTTCCCGCCGGCCTGCGAGCTTATTCTTCCCTGGGCAAACACGTGCCGGTCCGCACAATGGGCCCTGTGTGCGGCAATGTCATCAGGCCCCGCTGCGCCCATACTGGCTTCTGGGGGGGCAACACCTCAGTGTGCTCACCGCTCTGTCCAGGACTGCAGCGCTGCACCGGCCCGGGCACGGCCTTGCGCTGCGGCACCACCGGGTGTATTTTTGTGTCTCAGCAACAGCTGCAGGCGTACGTGTCCTGGGTGAACTTCCAGCTGAAGAGGAAGCCCAGAGTGAAGCCCGTCCAGGACCTGCGGCAGGACCTCCGTGATGGGGTCATCCTGGCCCACCTCATCGAAATCGTGGCCGGCGAGTTCCTGGAGGGTATCCACAGCACCCCCAGCGATGCCCAGGAGATGCGTGAGAACGTGGAGAAGGTCCTGCAGTTTGTGGCTTCCAAGCGCATCCGCATGCACCAGACCTCGGCCAAGGccaatcacagggcAGGGGCGAGCGCAGGGCGGGGCCAGACGGCGGCCTCGGACAACCACAGGCCGAATTCGGCCACGGCGATGGCCCAGAACGCCGTGGCAGCGCTGGCGGCGGCCCGTCAGGGCGCCTCTCGCTCGGGGCGCGGAGTGTTCCAGGCTCGGCAGGACTGGCATAGCCGGGGGCCCAGCCTGGATGATGAGATCGAGAACCCGTCGTGGAGCGTGCGGGTGCTGGTGCAGCAGTACGAAGGCCAGAAGAAGTCCACGGACAATGACCAGGCCTCGCCCTCTGGCTGTACCACAATCACAGCCCCTCTCTTCTCCCCACCATTCATCCATCCCTTTCTTCCACTCCTCTCCTACCTCTCCTCTGTTGCACATTGTCACTGCTCTGAGCACAGACCTGCTATCGTACTTGCAGGTTCCCCCCTGGGCAGGGTTTCCTGTCTCAGCATCGGCGCTCTGCAGGGAGATGTCACTCCCTGCCTCTGTGGGCCCGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004549 True 1461 mRNA 0.62 9 53233791 53244730

Neighbor

gene id symbol gene type direction distance location
AMCG00004547 hspb2 coding upstream 23018 53206423 ~ 53210773 (+)
AMCG00004548 NA coding upstream 38529 53193663 ~ 53195262 (+)
AMCG00004545 NA coding upstream 41600 53187590 ~ 53192191 (+)
AMCG00004542 NA coding upstream 131170 53076079 ~ 53102621 (+)
AMCG00004543 NA coding upstream 175037 53045999 ~ 53058754 (+)
AMCG00004554 dlat,LOC106563967 coding downstream 28970 53273700 ~ 53283989 (+)
AMCG00004555 NA coding downstream 48373 53293103 ~ 53295211 (+)
AMCG00004565 NA coding downstream 462364 53707094 ~ 53707967 (+)
AMCG00004564 NA coding downstream 472337 53717067 ~ 53719775 (+)
AMCG00004566 NA coding downstream 582217 53826947 ~ 53848054 (+)
G9000 NA non-coding upstream 87997 53145595 ~ 53145794 (+)
G8987 NA non-coding upstream 114095 53117197 ~ 53119696 (+)
G8982 NA non-coding upstream 126794 53106744 ~ 53106997 (+)
G8900 NA non-coding upstream 331009 52839448 ~ 52902782 (+)
G8836 NA non-coding upstream 611525 52619475 ~ 52622266 (+)
G9043 NA non-coding downstream 54933 53299663 ~ 53299872 (+)
G9160 NA non-coding downstream 620210 53864940 ~ 53866447 (+)
G9170 NA non-coding downstream 688439 53933169 ~ 53981983 (+)
G9191 NA non-coding downstream 768096 54012826 ~ 54013029 (+)
G9243 NA non-coding downstream 959491 54204221 ~ 54204990 (+)
G9012 NA other upstream 49808 53183394 ~ 53183983 (+)
AMCG00004509 NA other upstream 1220161 51989353 ~ 52013630 (+)
AMCG00004501 NA other upstream 1286973 51939549 ~ 51946818 (+)
G8606 NA other upstream 2118529 51114941 ~ 51115262 (+)
AMCG00004477 NA other upstream 2480359 50741388 ~ 50753432 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 14449 53259179 ~ 53270254 (+)
G9118 NA other downstream 359031 53603761 ~ 53607898 (+)
AMCG00004563 NA other downstream 391309 53636039 ~ 53670522 (+)
G9128 NA other downstream 403281 53648011 ~ 53843859 (+)
G9129 NA other downstream 432834 53677564 ~ 53861528 (+)

Expression


Co-expression Network