G8356


Basic Information

Item Value
gene id G8356
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50066435 ~ 50068081 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10311
TGACAGTTTCAAATGGTGCTgctaatgatgataatatatacagatgtaaacatgtaaaaaaaatataggaACACCTCACTTCTTAAAAAGGAGAACATTTATTGAGTGTTTTGAAAAGAATTTCTTGGAGCCACAGTTACACACAGCTTGTTCCAAATGAGGCCAAACATCCCCCCCAataagagaaaaaggaaaaactccACATATTATTGCAACACCCCATAGCATAAAGCGACATATCCAGCAGATTCAAAACTCAAGAGACATAGTTTGTCTCCATCTGCGTTACACAAGGCTTTTAATGCCGACTTACCTACACAAATGACGCCGCAATAGCAAACCACTGCATTCCTCTCTGCTTACTACTGCACACTAGGAATGATGAATgagtatacaaaaaaaacacgtGGACTGTGGAAGACTTTAGTGTTATCTCGTGGCAAATGATCAAGGCCTGCAACACTTTAAACAGTGCTCAACAGCACAATCATTAATTCAGTGGAAGGACAGGAGCACATGCCATAGCGTCAGTCCCGTTATCATTTTTGCTTGACTTGAGCAATGTGAGCTAAATACGGGCAGCTTTCGGTGTACAGTGCGCCTCTCTCCCTTCGGTGTCTGCTCCTACAGGAACAGGCCTCCATCTCcacttgtttgcattttacagACTCCTATCAGCACACCTGGTCTGTATATTTAAGACCGGTTTCTGTACAGATGCAGCACTAGTTTGCCACTTTAACCAGCTGTCCCAGTAAATTTTAGTTTCTAACTTGAAGGACTGTGCACAATTACTGTTAGTCCATCAGTCACAAAACGGCTGCAAACCCACAAAGcccagaggaaaaaaagaaaatgctttaggCTTACTGTTGTGATGTAATGCGATAAcagcattatttttaagttagaAAACAAGTCATTTCATTACAACTGCTCTTTTGAGAGGACAGAATAAAGCTTGAAAGCTTACAAGACTGATTAAGCACTTTCGAAAACTGGCTAAGCTTCCATGATCTTAAATAATTTTGCTACGGTGACTTCCCACATTAAAGccaataaaaaaagactgcttTGCCAACGAGAAAAATCGCCAAATAACAAAGTGGCCCTTTGATTTAGCACTTTAgcttttgctgtatttttttttcgtCTATGCGATTGATTTCTTTGAGTGACCATTTTAGCCTGGAATGTTTTGGAcacagaaaaaagcaaatgaaacGAGCAGCAACACCAGCAGAAACTAATGTGATTGAAGAAGTCAAACAAGGACAGAGTGATATTAGGCTGTGTAGAGGCAGAAAACAGTTTAAGCCCTTACATTTGGAAGACCGTTTAGATAATGATCATTTTCACAAGCGCACAAGCCAAGATGTCGGCTGTTTTTGTAAAGATGAGCACTGTGTTGACAGGTGTTGTGGCATTGCGCCTTTAAGTAGGCAGAGAGATGTGGTTGAGACTAAGATTTAATGTGTGATGTTAACCACCTATGAAGACCACAGAATTTGACTGCTTGGTAACTGTTTAAGGTCAGTCATCCAGTATCCCATGACTCAAGAGGATCTctaatttgttttagttttaagcATTAACATATCATTAAGAAGACCACTTGGTATGAATTTAGGGCCTCAATGATTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10311 True 1647 lncRNA 0.40 1 50066435 50068081

Neighbor

gene id symbol gene type direction distance location
AMCG00004455 LOC107601691 coding upstream 34093 50004310 ~ 50032342 (+)
AMCG00004453 kmt2a coding upstream 76771 49989275 ~ 49989664 (+)
AMCG00004448 LOC108233819,LOC107098727 coding upstream 78944 49984727 ~ 49987491 (+)
AMCG00004450 ube4a coding upstream 83277 49968474 ~ 49983158 (+)
AMCG00004452 NA coding upstream 102719 49952140 ~ 49963716 (+)
AMCG00004458 NA coding downstream 53348 50121429 ~ 50135834 (+)
AMCG00004459 NA coding downstream 116621 50184702 ~ 50187493 (+)
AMCG00004462 slc37a4,LOC106612980,LOC107670393,LOC107593481 coding downstream 131424 50199505 ~ 50212190 (+)
AMCG00004464 rps25,LOC107758587,LOC107583381,LOC107679519,LOC107565279 coding downstream 144136 50212217 ~ 50214554 (+)
AMCG00004468 NA coding downstream 190750 50258831 ~ 50265447 (+)
G8188 NA non-coding upstream 480340 49582118 ~ 49586095 (+)
G8167 NA non-coding upstream 630684 49434043 ~ 49435751 (+)
G8140 NA non-coding upstream 818401 49246488 ~ 49248034 (+)
G8111 NA non-coding upstream 1037252 49024156 ~ 49029183 (+)
G8103 NA non-coding upstream 1106604 48955967 ~ 48959831 (+)
G8371 NA non-coding downstream 69548 50137629 ~ 50139705 (+)
G8372 cbl,LOC107601723 non-coding downstream 75224 50143305 ~ 50144990 (+)
G8373 NA non-coding downstream 77290 50145371 ~ 50145823 (+)
G8374 NA non-coding downstream 79795 50147876 ~ 50148195 (+)
G8375 cbl non-coding downstream 80803 50148884 ~ 50149121 (+)
AMCG00004449 NA other upstream 114902 49938552 ~ 49951533 (+)
AMCG00004442 NA other upstream 252411 49806361 ~ 49814024 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other upstream 747600 49298736 ~ 49318835 (+)
AMCG00004424 NA other upstream 1006380 49043590 ~ 49060055 (+)
AMCG00004421 NA other upstream 1040080 48897117 ~ 49026355 (+)
G8377 NA other downstream 83183 50151264 ~ 50157719 (+)
AMCG00004463 NA other downstream 168596 50236677 ~ 50243043 (+)
AMCG00004477 NA other downstream 673307 50741388 ~ 50753432 (+)
G8606 NA other downstream 1046860 51114941 ~ 51115262 (+)
AMCG00004501 NA other downstream 1871468 51939549 ~ 51946818 (+)

Expression


Co-expression Network