G9074


Basic Information

Item Value
gene id G9074
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53493495 ~ 53493710 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11216
TTTGAACTGGAGGCTGGAGCAGAGTGGAGACTTTGTACTTaactctcgctcgctctctctccctccctctctctcgctctgctctctttctttcttcctttctctctcaaaGTCTGTGCTTTTGTGcgagagtgcatgtgtgtgcagagGGGTGGCACCTATACCGGACTAGCAGCcaaaaaggaagagagaaaaaatgaaaagcggAGAAGAGGA

Function

GO:

id name namespace
GO:0021510 spinal cord development biological_process
GO:0021514 ventral spinal cord interneuron differentiation biological_process
GO:0021515 cell differentiation in spinal cord biological_process
GO:0021517 ventral spinal cord development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11216 True 216 lncRNA 0.37 1 53493495 53493710

Neighbor

gene id symbol gene type direction distance location
AMCG00004557 NA coding downstream 195398 53297456 ~ 53298097 (-)
AMCG00004556 NA coding downstream 202756 53285294 ~ 53290739 (-)
AMCG00004550 NA coding downstream 290943 53196270 ~ 53202552 (-)
AMCG00004552 alg9,LOC107691744 coding downstream 315051 53164673 ~ 53178444 (-)
AMCG00004553 NA coding downstream 331143 53151871 ~ 53162352 (-)
AMCG00004559 NA coding upstream 33158 53526868 ~ 53533837 (-)
AMCG00004558 LOC102781260 coding upstream 79820 53573530 ~ 53586212 (-)
AMCG00004561 NA coding upstream 93565 53587275 ~ 53605416 (-)
AMCG00004562 usf1,LOC107657261,LOC107601709 coding upstream 114097 53607807 ~ 53611269 (-)
AMCG00004560 NA coding upstream 124712 53618422 ~ 53627882 (-)
G9048 NA non-coding downstream 208524 53281051 ~ 53284971 (-)
G9002 NA non-coding downstream 345521 53147765 ~ 53147974 (-)
G8981 NA non-coding downstream 388659 53101901 ~ 53104836 (-)
G8833 NA non-coding downstream 939122 52553919 ~ 52554373 (-)
G8829 NA non-coding downstream 1124032 52369239 ~ 52369463 (-)
G9141 NA non-coding upstream 168674 53662384 ~ 53663246 (-)
G9145 NA non-coding upstream 200494 53694204 ~ 53695507 (-)
G9146 NA non-coding upstream 203666 53697376 ~ 53700585 (-)
G9149 NA non-coding upstream 227532 53721242 ~ 53722122 (-)
G9153 NA non-coding upstream 300368 53794078 ~ 53829780 (-)
AMCG00004551 NA other downstream 304102 53179022 ~ 53189393 (-)
G8937 NA other downstream 542108 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 581743 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 619387 52850483 ~ 52874108 (-)
G8761 NA other downstream 1421909 52068053 ~ 52071586 (-)
AMCG00004567 NA other upstream 192706 53686416 ~ 53863369 (-)
AMCG00004575 NA other upstream 538924 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 862750 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 948061 54441771 ~ 54450341 (-)
G9414 NA other upstream 1082930 54576640 ~ 54620055 (-)

Expression


Co-expression Network