G9414


Basic Information

Item Value
gene id G9414
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54576640 ~ 54620055 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11664
CAGCCGGCAGGATCAGACAGAAGGGCGGATCTAAACGAGCAGTCAAACTACCTGTGTAGACTGAACTCAATCCACTGTTTTGCCTGGAGAAGGAGACTGAGGCACACAAACTGAAAGTGTAGAGTGTAGAGATCAGAATCTGATTAACCATTTTTGTCTGAACTGTCGGGAAGAAACACTGGTAGTTTTCTACCTTCAGCGGCTCTGGATAAGggagggtgtctgccaagaacgAAAAATATTACCAGGAAGGTTTAGTGGGCAATTTGGCCCCTTTCTTGCCTGTGATCTCCACACTCCACGTACTTGAGCCGGGAGCTGGGGACATCAACTGATCGATCATGCCGACGGACACTGAAGCAGCTTTGGAGTCGTCCAGCCCCCTTAATCCCTCAAGCAAAGGCAAACCCAGGAAGAAAATGCCAGCCACGACCAAACGACCGTTGAAGGAGCGATGCTCCGTGCAGTGGATGGTCATCACAGTGCTGATCGTGCTCACTCTGCTGGGGCTGCTGATCACTGGGGCATACTTCCTGAAGATTCTGATCGACACCAACTTCTTCTTCTGCAAGACATCCTTTAAGTTTATCCCCCGCTCCAAGGTGTGTGACGGGAAGGCGGACTGTGCGAATAGGGAGGACGAGCTGATGTGTGTGACCAACCTGACGATCAACTCCTCCTTCCCAGGTAC
>TU11665
ATTTCAGGGAAGCTGCTGTTGAGATTTAGATGAGCCACAAACCAGTGACAGCCGGCAGCAAACTGCTCGAAAGAAGGGCGGATCTGAACGAGGGCAGTCAAACTACCTGCGTGCAGCAGCACTGAACTCAATCAGCTGTTTTGCCTGGAGAAGGAGACAAACTGAAAGAGCAAAGATCAGAGTCTGAGGAACACAATCTCTGAACCGGCAGGAAGAAACTCCGGTAGTTTTCTATTACTGGGAAGGTTAAGTGGGGGCATCAACTGATCGATCATGCCGACGGACACTGAAGCAGCTTTGGAGTCGTCCAGCCCCCTTAATCCCTCAAGCAAAGGCAAACCCAGGAAGAAAATGCCAGCCACGACCAAACGACCGTTGAAGGAGCGATGCTCCGTGCAGTGGATGGTCATCACAGTGCTGATCGTGCTCACTCTGCTGGGGCTGCTGATCACTGGGGCATACTTCCTGAAGATTCTGATCGACACCAACTTCTTCTTCTGCAAGACATCCTTTAAGTTTATCCCCCGCTCCAAGGTGTGTGACGGGAAGGCGGACTGTGCGAATAGGGAGGACGAGCTGATGTGTGTGACCAACCTGACGATCAACTCCTCCTTCCCAGGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11664 True 691 TUCP 0.51 4 54576640 54583230
TU11665 False 623 TUCP 0.52 4 54576640 54620055

Neighbor

gene id symbol gene type direction distance location
AMCG00004599 sidt2 coding downstream 177722 54394475 ~ 54398918 (-)
AMCG00004592 NA coding downstream 202693 54373699 ~ 54373947 (-)
AMCG00004591 NA coding downstream 220191 54355007 ~ 54356449 (-)
AMCG00004589 NA coding downstream 234074 54331248 ~ 54342566 (-)
AMCG00004583 NA coding downstream 350587 54223803 ~ 54226053 (-)
AMCG00004607 NA coding upstream 79761 54699816 ~ 54708011 (-)
AMCG00004622 NA coding upstream 357792 54977847 ~ 54998428 (-)
AMCG00004621 NA coding upstream 389649 55009704 ~ 55018100 (-)
AMCG00004620 NA coding upstream 410205 55030260 ~ 55035952 (-)
AMCG00004625 ugdh coding upstream 496582 55116637 ~ 55136087 (-)
G9273 NA non-coding downstream 303353 54258563 ~ 54273287 (-)
G9261 NA non-coding downstream 370627 54205553 ~ 54206013 (-)
G9217 NA non-coding downstream 489602 54086575 ~ 54087038 (-)
G9161 NA non-coding downstream 710965 53864951 ~ 53865675 (-)
G9153 NA non-coding downstream 746860 53794078 ~ 53829780 (-)
G9427 NA non-coding upstream 28996 54649051 ~ 54676988 (-)
G9431 NA non-coding upstream 57609 54677664 ~ 54677917 (-)
G9445 NA non-coding upstream 73291 54693346 ~ 54789735 (-)
G9461 NA non-coding upstream 166339 54786394 ~ 54788637 (-)
G9502 NA non-coding upstream 303474 54923529 ~ 54974997 (-)
AMCG00004598 NA other downstream 126299 54441771 ~ 54450341 (-)
AMCG00004590 LOC106612637 other downstream 203013 54356460 ~ 54373627 (-)
AMCG00004575 NA other downstream 533212 54032634 ~ 54043428 (-)
AMCG00004567 NA other downstream 713271 53686416 ~ 53863369 (-)
AMCG00004551 NA other downstream 1387247 53179022 ~ 53189393 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other upstream 295529 54915584 ~ 54919938 (-)
G9604 NA other upstream 747530 55367585 ~ 55420058 (-)
G9608 NA other upstream 762161 55382216 ~ 55388939 (-)
AMCG00004640 NA other upstream 909595 55529650 ~ 55551225 (-)
AMCG00004649 NA other upstream 1117510 55737565 ~ 55743297 (-)

Expression


Co-expression Network