AMCG00004621


Basic Information

Item Value
gene id AMCG00004621
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55009704 ~ 55018100 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004621
ATGGACGTGCCGCTTGTGCGTGGACTGCTGCTCCTGTGCTACGCCAGCCACCTGCTGACCCCGGCCTCCCCCGGCAGGGCCGAGGAGCCGGGCCGAGCCGGGCCGCTGGGCATCAGGGTGCCGCTGCGCAAGGGGCTGCCGCAGGACCGCCCCCGGCTCCCGGAcccgccgccgccgcccccCGCCCGGCCTCGCCACCCCAGGGACGCCCGGGCCGCTCGGGGCACCGGCGCGGTCAACTTCGTGGAGATGATTGACAACCTGCGGGGGAAGTCCGGGCAGGGGTACTACGTGGAGATGACCGTGGGCACCCCGCCGCAGAAGCTCAATATCCTGGTGGACACGGGCAGCAGTAACTTTGCAGTGGGAGCAGCTGCCCACCCCTTCCTCAGGAGATACTATCACCGCTCACTCTCCAGTTCGTACCGGGCGCTGGGCCGCAGTGTGTATGTTCCGTACACGCAGGGCCGCTGGGAGGGGGAGCTGGGCACTGACCTGGTGTCCATCCCCCACGGTCCCAACcctGACGAGACTCTGGAGCCATTCTTTGACTCCCTAGTGCGTCAGACCCCGGTGCCCAACCTGTTCTCCCTGCAGCTGTGTGGGGCCGGGTACAGCGGCAACGACAGCCAGGGCCCTGCCACCGTGGGGGGCAgcatgATCATCGGGGGGGTGGACCCCTCTCTGTTCGCGGGGGAGCTGTGGTACACGCCCATCCGCCGGGAGTGGAAGGTGTTCCAGTCTGCGGTGAAGGCCATTGAGGCAGCCTCCTCAGCTGGCACCACTCCCTGGCACATCTTCCCTGTGATCTCCCTGTACCTGATGGGCGAGAGCCGCAACCAGTCCTTCCGCATCTCCATCCTGCCACAGCAGTACCTGCGGCCCGTGGAGGACGTAGCCTCCTCTCAGGAGGACTGCTACAAGTTTGCCATCTCCCAGTCCAGCACGGGCACCGTCATGGGCGCCGTCATCATGGAGGGCTTCTACGTGGTGTTTGACCGGCAGCGGCACCGGATCGGATTCGCCGTCAGCACCTGCCACGTGCATGACGAGTTCCGCACAGCTTCGGTGGAGGGGCCGTTCCCGGGGGCGGAGCTGGAGGACTGCGGCTACAACGTCCCCCAGACAGACGAGTCCACGCTCATGACCATCGCCTACGTCATGGCGGCCGTGTGCGCCCTGTTCATGCTGCCGCTCTGCCTCATGGTGTTCCAGTGGCGCTGCGCCCGCTGCCTGCGGCCGGCGGGGGGGGACTTTGCCGACGACATCTCGCTGCTCAAGTagaccggggggggggggggggggg

Function

GO: NA

KEGG:

id description
K04521 BACE1; beta-site APP-cleaving enzyme 1 (memapsin 2)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004621 True 1306 mRNA 0.68 9 55009704 55018100

Neighbor

gene id symbol gene type direction distance location
AMCG00004622 NA coding downstream 11276 54977847 ~ 54998428 (-)
AMCG00004607 NA coding downstream 301693 54699816 ~ 54708011 (-)
AMCG00004605 NA coding downstream 402877 54601459 ~ 54606827 (-)
AMCG00004599 sidt2 coding downstream 610786 54394475 ~ 54398918 (-)
AMCG00004592 NA coding downstream 635757 54373699 ~ 54373947 (-)
AMCG00004620 NA coding upstream 12160 55030260 ~ 55035952 (-)
AMCG00004625 ugdh coding upstream 98537 55116637 ~ 55136087 (-)
AMCG00004627 NA coding upstream 122805 55140905 ~ 55141489 (-)
AMCG00004628 NA coding upstream 186985 55205085 ~ 55219718 (-)
AMCG00004633 NA coding upstream 206735 55224835 ~ 55270161 (-)
G9504 NA non-coding downstream 906 55007762 ~ 55008798 (-)
G9512 NA non-coding downstream 5901 55001583 ~ 55003803 (-)
G9502 NA non-coding downstream 34707 54923529 ~ 54974997 (-)
G9445 NA non-coding downstream 219969 54693346 ~ 54789735 (-)
G9461 NA non-coding downstream 221067 54786394 ~ 54788637 (-)
G9517 NA non-coding upstream 1797 55019897 ~ 55020096 (-)
G9523 NA non-coding upstream 55946 55074046 ~ 55074375 (-)
G9533 NA non-coding upstream 96242 55114342 ~ 55116494 (-)
G9570 NA non-coding upstream 244825 55262925 ~ 55263287 (-)
G9593 NA non-coding upstream 328683 55346783 ~ 55357633 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other downstream 89766 54915584 ~ 54919938 (-)
G9414 NA other downstream 389649 54576640 ~ 54620055 (-)
AMCG00004598 NA other downstream 559363 54441771 ~ 54450341 (-)
AMCG00004590 LOC106612637 other downstream 636077 54356460 ~ 54373627 (-)
AMCG00004575 NA other downstream 966276 54032634 ~ 54043428 (-)
G9604 NA other upstream 349485 55367585 ~ 55420058 (-)
G9608 NA other upstream 364116 55382216 ~ 55388939 (-)
AMCG00004640 NA other upstream 511550 55529650 ~ 55551225 (-)
AMCG00004649 NA other upstream 719465 55737565 ~ 55743297 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other upstream 796302 55814402 ~ 55846171 (-)

Expression


Co-expression Network