G9423


Basic Information

Item Value
gene id G9423
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54668228 ~ 54674910 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11680
cagggagagagagacggggagagcaGTTTCAGGAGGAAAGGAAGCAAGGGCTGGAAAGCAAGAAGAGGGACTGTTTCTTTAGGAAAGAGACGGGAGAAgtggaggagcaggaggaggcgAGAGCGAAGAAGCACGAGGAGAAAGCTCTGTGATTTGGAAGGCCTCGCCATGAATTCCACATTTGAAATCCTGTTTGCCAGAATGCCAACCCTCCCCCCACCACAGGTTGTCAGTTCCCGGGTGGATCCCGTGGCCCTTGCTGTCGTCATCGCTGTGTGTCTTGTGCTGGCCATTGTCCTTTACTGCATCCTGAAGAGGTGCTGCAAGAAGATGTGCCACCGTCCCAAGCCCACTTTGAATCAGCAAATAATGAAGAAGCTGGGAGTACAGAAGTCCTCTCCTCCTTTCTCTGTCAGCGGCATGATGGCCAACAGGGAGAAGAAGTAGGACTAACGCAAAGGGGGGGGCTCAAGGGACTGACAAACGAAAAGACGGACACAGCCACCTgcttcacagagagagagagagagagagagagagggatcaTCCACTCACaagcctctctttctctccctctcctcatcCTGTTTCTCATTCCCATTCGGAGGTGGAGCTACACAGATCCCAGAGACCCAGCAGATCTCTCTGCACTGGACTGTCCGTTACCCCGCTCACTCAGCTCCCACTCCCTGATTGGATGGTTTATTCTACTCTCGCACCCCTATGTTTGCACAGAAAACTGCTGTTCTCAGGTGTGTAAATACTGTGGGCTCATTCGCATTTATATTCCAGTTATTTTACTATAACAGGTGACAGACAAAACatacggaagcgtattgctgccacacgaaaaaaatatatatcacgtAATTAGGTGATAACTATCACGTTTTTACGTGATACTGAATTATCACGTTTTTACATGTTAGGGAATTATTACGTTATTACGTGATAgggaattgtcacataataacagactgaaTTAGAATACCTgagacaaaacaatgatgtcagACGTTAGAGATTGTGTACGAAATTACTTTAGGTTCCTATAACTCAATACTtatccaattacattttaaatcacaaacacaatcaatcttaaaaatatctgtgaaaatagCAACACACCGTTTCGCTTTAATCAAAGTCCATGCGTCCAGCTATTATTTACatcatctttatttacacattttcttcaaaacaaggtaCAGGTGGTTGAAAACCGGTCTGTGACCCAACAATACACCATCTATCCCCCGCCCCATCCACTTTCCTGAACTTCAATCCTTCCCCTTTCTCACCCAATTATCAATTACATTATTGATCAagttatcaaatgaaaaataattgaattatgtacactcaatacagaaatacaagtgaaacaaaacatattattatcaatgtttattaatacatcAATTGGCTCCTACAAACATTACTATTTGAAGATCAGGAATATGTATGTGATCATGGACAAACACAGCATGTCGATCAAATTGAATCTGGGACATCGCACATTCTATCGAGACAACAGTAATAatcttaaaaatagaaactactcaatatgaattatcctgaacaaatgcacattatttatatCGTCAGACTATCGTTTTAGCCTGGGTggaaacatacactcacctaaaggattattaggaacaccatactaatactgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11680 True 1684 lncRNA 0.42 5 54668228 54674910

Neighbor

gene id symbol gene type direction distance location
AMCG00004601 NA coding upstream 96484 54564095 ~ 54571744 (+)
AMCG00004602 NA coding upstream 147570 54515030 ~ 54520658 (+)
AMCG00004603 NA coding upstream 154589 54495757 ~ 54513639 (+)
AMCG00004596 NA coding upstream 200489 54457064 ~ 54467739 (+)
AMCG00004593 NA coding upstream 233525 54426991 ~ 54434703 (+)
AMCG00004611 dscaml1,LOC106534979,LOC107699210,LOC107728164,LOC107752281 coding downstream 143692 54818602 ~ 54827192 (+)
AMCG00004617 NA coding downstream 209151 54884061 ~ 54894951 (+)
AMCG00004613 NA coding downstream 220955 54895865 ~ 54913735 (+)
AMCG00004615 dscaml1,LOC105417068,LOC101484774,LOC102301208 coding downstream 243452 54918362 ~ 54927251 (+)
AMCG00004612 NA coding downstream 276757 54951667 ~ 54953121 (+)
G9399 NA non-coding upstream 56885 54608900 ~ 54611343 (+)
G9298 NA non-coding upstream 223711 54384226 ~ 54444517 (+)
G9250 NA non-coding upstream 455573 54212447 ~ 54212655 (+)
G9249 NA non-coding upstream 456805 54210909 ~ 54211423 (+)
G9248 NA non-coding upstream 457522 54210341 ~ 54210706 (+)
G9435 NA non-coding downstream 24906 54699816 ~ 54704226 (+)
G9464 NA non-coding downstream 127067 54801977 ~ 54802435 (+)
G9521 NA non-coding downstream 385180 55060090 ~ 55060304 (+)
G9524 NA non-coding downstream 415471 55090381 ~ 55090641 (+)
G9525 NA non-coding downstream 439441 55114351 ~ 55114914 (+)
AMCG00004604 NA other upstream 39009 54600618 ~ 54629219 (+)
AMCG00004595 NA other upstream 185437 54470018 ~ 54482791 (+)
G9300 sidt2 other upstream 272928 54394791 ~ 54395300 (+)
AMCG00004588 NA other upstream 313252 54346502 ~ 54354976 (+)
AMCG00004585 nfrkb,LOC107567165,LOC107715331,LOC107693532 other upstream 340629 54314122 ~ 54327599 (+)
AMCG00004606 NA other downstream 49846 54724756 ~ 54743005 (+)
AMCG00004608 LOC103361032,LOC104918006,LOC103372158 other downstream 69804 54744714 ~ 54765829 (+)
AMCG00004609 NA other downstream 93700 54768610 ~ 54778903 (+)
AMCG00004610 NA other downstream 108836 54783746 ~ 54789762 (+)
G9522 NA other downstream 399136 55074046 ~ 55074459 (+)

Expression


Co-expression Network