G9521


Basic Information

Item Value
gene id G9521
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55060090 ~ 55060304 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11808
ggcaggagaggaggatggagtgatcaacggtgtgaaatgctgcggagaggtcaaggaggatgaggactgaggagagggaggctgcccgagcacggctgagggagtcagtgactgccaggagagccgtctcagtggagtgagctgtgcggaagccggattgcagaggatcaaggagtgagtgttgggacagaaagtcagagagctgacggtggacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11808 True 215 lncRNA 0.60 1 55060090 55060304

Neighbor

gene id symbol gene type direction distance location
AMCG00004619 NA coding upstream 50770 55002426 ~ 55009320 (+)
AMCG00004614 tagln,LOC106567831,LOC101483357 coding upstream 86248 54964810 ~ 54973842 (+)
AMCG00004616 NA coding upstream 101132 54958320 ~ 54958958 (+)
AMCG00004612 NA coding upstream 106969 54951667 ~ 54953121 (+)
AMCG00004615 dscaml1,LOC105417068,LOC101484774,LOC102301208 coding upstream 132839 54918362 ~ 54927251 (+)
AMCG00004623 NA coding downstream 12193 55072497 ~ 55073081 (+)
AMCG00004626 NA coding downstream 90435 55150739 ~ 55154214 (+)
AMCG00004624 NA coding downstream 96762 55157066 ~ 55171212 (+)
AMCG00004635 NA coding downstream 364131 55424435 ~ 55431470 (+)
AMCG00004636 NA coding downstream 418642 55478946 ~ 55481056 (+)
G9464 NA non-coding upstream 257655 54801977 ~ 54802435 (+)
G9435 NA non-coding upstream 355864 54699816 ~ 54704226 (+)
G9423 NA non-coding upstream 385180 54668228 ~ 54674910 (+)
G9399 NA non-coding upstream 448747 54608900 ~ 54611343 (+)
G9298 NA non-coding upstream 615573 54384226 ~ 54444517 (+)
G9524 NA non-coding downstream 30077 55090381 ~ 55090641 (+)
G9525 NA non-coding downstream 54047 55114351 ~ 55114914 (+)
G9526 NA non-coding downstream 54700 55115004 ~ 55116494 (+)
G9527 NA non-coding downstream 58689 55118993 ~ 55123517 (+)
G9531 NA non-coding downstream 66724 55127028 ~ 55127303 (+)
AMCG00004610 NA other upstream 270328 54783746 ~ 54789762 (+)
AMCG00004609 NA other upstream 281187 54768610 ~ 54778903 (+)
AMCG00004608 LOC103361032,LOC104918006,LOC103372158 other upstream 294261 54744714 ~ 54765829 (+)
AMCG00004606 NA other upstream 317085 54724756 ~ 54743005 (+)
AMCG00004604 NA other upstream 430871 54600618 ~ 54629219 (+)
G9522 NA other downstream 13742 55074046 ~ 55074459 (+)
G9532 ugdh,LOC107757604 other downstream 67374 55127678 ~ 55128052 (+)
AMCG00004632 NA other downstream 234871 55295175 ~ 55361709 (+)
AMCG00004634 NA other downstream 315791 55376095 ~ 55459404 (+)
AMCG00004644 NA other downstream 507828 55568132 ~ 55605485 (+)

Expression


Co-expression Network