AMCG00004635


Basic Information

Item Value
gene id AMCG00004635
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55424435 ~ 55431470 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004635
GAGCCCGTATTAAACAGCAGTCTGTCATGCCTGAGGGCTGCAGTTCACAGCCTGACCAACACTTACGCTGCTGCCCTGCTCGCCTACACCTTCACCCTGGCTGGGGAGGAGGACACCAGGGCCAGCCTTCTCGCCAAGCTGGATGTGCTGGACACCACTGAGGGTGACTCCCTGTCAGTAGAGATGAACTCCTATACTCTGCTGGCACTCCTCAGCCACCAACCCCTGTCCTCCTCTGACCTGGGACGCGCCTCTAGGATCGTCGGCTGGCTGATCAAACAGCAGAACCCCTATGGAGGATTCTCTTCCACACAGGAGAAGGAGCTGCTGGACCTCCTGGGGCGGTACAGTGTGGAGGCAGAGGGCACAGGCTGTGTGTCTATCCAGATCTCTCTCCACTACAACACCCCTCCCCCCGCCGACTTTGTCCACTTCCACCTGACCTTGAAGGCTCACCAGGaatgcaacagcagcagcaagagTAGAGACCTCAGCCTCTCTGCCAATGTCACGTACACCGGCCCAAGGGAAAACACCAACATGGTCATTCTGAACTTCAAACTCCTCTCTGGATTCATCTTTAAAGAGACACCTCTAATGCCTCTGGGAGCACAAGAGCTGGTGAAGCGCATCGACAAAGAAGACGGACATGTGATTCTGTATCTGGATGGGATCATGGAGAAGACATCAATGAAGTGTAAAACCAAAACACGGACTGCGGAAAATGTTCAGCGATGGTGTGGAGCCGAGGATTGACAATCTACCATTTACTGAATGTCTTATGTATTCCGTATCTGTATAAAATCCCTACAATGCACCACAGACCCACACAATCCGAGTTTTCTCATTTAGTGAATGGAACATTAAAAAGGTAATTTCTTAACTGGAAGAAATCAAATTGAAAACTATCATGgtcctaaataaaatatttgtattactaacAGGGCAGCATTCCACAGAGTAGATTAACACAGTAGaaaacaccaacaaaataataaagtctTGTCATAAGAAATGCAGTTCCTCTGAATTGGAGATGTTTAAAAAAGATCAATATCAGAATGTATAAAGTGAACACTTTAGGTTAACCTCACAGCAGCCACCATCTCAAGCTCTGACATCAAACTAGACTACCTCCTTTTAGTACAGACACAGCTTTATAAAGTTGGTGTGAGCAGGTCCTCCCACTTTGGGTTCACCATCACAGAAacccaaacacaaaaacaggggggattcaaaataaacaaagacattttctggccagaaataaacatacaaacaaacactttaaataaagttATCAAAATGAATTTTCCACAA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004635 True 1320 mRNA 0.46 7 55424435 55431470

Neighbor

gene id symbol gene type direction distance location
AMCG00004624 NA coding upstream 253223 55157066 ~ 55171212 (+)
AMCG00004626 NA coding upstream 270221 55150739 ~ 55154214 (+)
AMCG00004623 NA coding upstream 351354 55072497 ~ 55073081 (+)
AMCG00004619 NA coding upstream 415115 55002426 ~ 55009320 (+)
AMCG00004614 tagln,LOC106567831,LOC101483357 coding upstream 450593 54964810 ~ 54973842 (+)
AMCG00004636 NA coding downstream 47476 55478946 ~ 55481056 (+)
AMCG00004639 NA coding downstream 59698 55491168 ~ 55522237 (+)
AMCG00004638 NA coding downstream 117785 55549255 ~ 55554220 (+)
AMCG00004643 NA coding downstream 200125 55631595 ~ 55652721 (+)
AMCG00004645 NA coding downstream 240488 55671958 ~ 55681643 (+)
G9569 NA non-coding upstream 161167 55263043 ~ 55263268 (+)
G9531 NA non-coding upstream 297132 55127028 ~ 55127303 (+)
G9527 NA non-coding upstream 300918 55118993 ~ 55123517 (+)
G9526 NA non-coding upstream 307941 55115004 ~ 55116494 (+)
G9525 NA non-coding upstream 309521 55114351 ~ 55114914 (+)
G9644 NA non-coding downstream 131811 55563281 ~ 55572079 (+)
G9718 NA non-coding downstream 345318 55776788 ~ 55780421 (+)
G9721 NA non-coding downstream 357339 55788809 ~ 55789057 (+)
G9723 NA non-coding downstream 378913 55810383 ~ 55858397 (+)
G9749 NA non-coding downstream 464198 55895668 ~ 55896523 (+)
AMCG00004632 NA other upstream 62726 55295175 ~ 55361709 (+)
G9532 ugdh,LOC107757604 other upstream 296383 55127678 ~ 55128052 (+)
G9522 NA other upstream 349976 55074046 ~ 55074459 (+)
AMCG00004610 NA other upstream 634673 54783746 ~ 54789762 (+)
AMCG00004609 NA other upstream 645532 54768610 ~ 54778903 (+)
AMCG00004644 NA other downstream 136662 55568132 ~ 55605485 (+)
AMCG00004642 NA other downstream 176069 55607539 ~ 55613041 (+)
AMCG00004650 NA other downstream 326801 55758271 ~ 55801268 (+)
AMCG00004673 NA other downstream 884142 56315612 ~ 56359797 (+)
AMCG00004681 NA other downstream 1058623 56490093 ~ 56499584 (+)

Expression


Co-expression Network