G9718


Basic Information

Item Value
gene id G9718
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55776788 ~ 55780421 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12046
CAAGACTACAGCTTCAGACCTCCAAGCTGAGTTGTTCAGAGACTCGTTCAACTCTTACAGCTCTTCATCCTCatacgagccgcagagttctggatgagctggagcggcgggcagtagttgcaggcaggccagccaggagggagttgcagtagtccaggcgggagaggaccagggactggacgagcagctgaatCAATAGTCTGTGAGGAAGTGTCATATTCAGCATATTTTTCTCAAgagaatctgcaggtgcatgtcagcgtggtgatgtgctgagtgtaggagagcgcaggatcaaagtcttcttagtggaagaagaggcagagtgtcatagattccaaggggatttcGATGGAGAGGTCAGTAGTGTAACATTTTTCTATAACACAAAGGCATTCTTTCATATATTATATGGAGGATTATTAAGCCTAGAAAAACAGGCTTAATCAAGACAACTGCCAGATATAGGGTTACCAAAATCACGTAAAATCGCGTATGCTATACACTTGTGAATGCAGGATCCTATCCCCGCATAATCCAATgtcatgtaaacaaaaatagTCCATGCAATGTCCCGAGTAATCCAATAACGTGGATATGTCAAACAAGAGAAAAAGGAAGGATCTCACCGGCTTGATGCGCTCTCCGACGAGAGATGTCGAGTGCGGTGAATCCAGGCTTTAAACCGCAATGCGATTCTCTCCATGAACCGGTTCGAAAGAAACGCAGGATCcgaaaatagtaaaaaaatgaTCAACCCAAAAATCAAGTAGCCATGGATTATAGAGCAAAAAATACGCTCAAGACTCAGAGAGTAATCATATAGCTCTGAGTAACAAATATTACAGAGACATGACAGTGCGACGACTTTAGGTCTGTGAAAATACAACCCCGTCCTGAGAACCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12046 True 908 lncRNA 0.47 2 55776788 55780421

Neighbor

gene id symbol gene type direction distance location
AMCG00004647 NA coding upstream 48389 55728040 ~ 55728399 (+)
AMCG00004646 NA coding upstream 75171 55701021 ~ 55701617 (+)
AMCG00004645 NA coding upstream 95145 55671958 ~ 55681643 (+)
AMCG00004643 NA coding upstream 124067 55631595 ~ 55652721 (+)
AMCG00004638 NA coding upstream 222568 55549255 ~ 55554220 (+)
AMCG00004651 NA coding downstream 71225 55851646 ~ 55857119 (+)
AMCG00004658 tpi1 coding downstream 203029 55983450 ~ 55989820 (+)
AMCG00004657 LOC104943838 coding downstream 214276 55994697 ~ 56001754 (+)
AMCG00004655 NA coding downstream 235791 56016212 ~ 56035949 (+)
AMCG00004659 NA coding downstream 259454 56039875 ~ 56059971 (+)
G9644 NA non-coding upstream 204709 55563281 ~ 55572079 (+)
G9569 NA non-coding upstream 513520 55263043 ~ 55263268 (+)
G9531 NA non-coding upstream 649485 55127028 ~ 55127303 (+)
G9527 NA non-coding upstream 653271 55118993 ~ 55123517 (+)
G9526 NA non-coding upstream 660294 55115004 ~ 55116494 (+)
G9721 NA non-coding downstream 8388 55788809 ~ 55789057 (+)
G9723 NA non-coding downstream 29962 55810383 ~ 55858397 (+)
G9749 NA non-coding downstream 115247 55895668 ~ 55896523 (+)
G9752 NA non-coding downstream 130331 55910752 ~ 55917209 (+)
G9814 NA non-coding downstream 329936 56110357 ~ 56111372 (+)
AMCG00004642 NA other upstream 163747 55607539 ~ 55613041 (+)
AMCG00004644 NA other upstream 171303 55568132 ~ 55605485 (+)
AMCG00004634 NA other upstream 317384 55376095 ~ 55459404 (+)
AMCG00004632 NA other upstream 415079 55295175 ~ 55361709 (+)
G9532 ugdh,LOC107757604 other upstream 648736 55127678 ~ 55128052 (+)
AMCG00004673 NA other downstream 535191 56315612 ~ 56359797 (+)
AMCG00004681 NA other downstream 709672 56490093 ~ 56499584 (+)
G9889 NA other downstream 757833 56538254 ~ 56542063 (+)
AMCG00004702 NA other downstream 883719 56664140 ~ 56896215 (+)
AMCG00004695 gapdh,LOC107596669 other downstream 1005431 56785852 ~ 56801892 (+)

Expression


Co-expression Network