AMCG00004638


Basic Information

Item Value
gene id AMCG00004638
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55549255 ~ 55554220 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004638
AtgagtacagACTGGAGCCCCACTCTCTGGAAGGACACTTTCAATGAACTGCTGGAAGACGAGCTGGAATACAATGACAGCTGGAGCTTCCAGTTCAATCACAGCCTGAAGGAGGATGCCAGCCAGGAGGAGAGAAGACGGGGCTGGAAGATTTACAGCCGCTGTATCTATGGCACGTTTAAGTGCAGCAACTGCTCCAAAACGTGGCCTTCCGCCCAGATCATGGTTGTCTTTCACTACCGGCTGCGCAGCGACCGGGGCACCGTCCTGATGAGGGCGTTCAGGCAGGCGTGTCGACATTGCAGCGGCAAGTACGAAAAGCCGGGGTTTACCAAGCAGGCGGTGGAGGAGCTTCTCCTTAGACTGATGGGCAAAATTAAGAAGAACTGCTACGGCTGTGCAGATGACGGGGAATACAATCCTGTCTGCTCTGAAACAGTTAGGACCAAACCACACGAGAGCTCGCTGTGTGAAGCCTGCAGCCAGGGCATCTGTTGCAAAGATGAGTAG

Function

GO: NA

KEGG:

id description
ko04622 RIG-I-like receptor signaling pathway
ko05161 Hepatitis B
ko05162 Measles

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004638 True 510 mRNA 0.54 3 55549255 55554220

Neighbor

gene id symbol gene type direction distance location
AMCG00004639 NA coding upstream 27018 55491168 ~ 55522237 (+)
AMCG00004636 NA coding upstream 68199 55478946 ~ 55481056 (+)
AMCG00004635 NA coding upstream 117785 55424435 ~ 55431470 (+)
AMCG00004624 NA coding upstream 378043 55157066 ~ 55171212 (+)
AMCG00004626 NA coding upstream 395041 55150739 ~ 55154214 (+)
AMCG00004643 NA coding downstream 77375 55631595 ~ 55652721 (+)
AMCG00004645 NA coding downstream 117738 55671958 ~ 55681643 (+)
AMCG00004646 NA coding downstream 146801 55701021 ~ 55701617 (+)
AMCG00004647 NA coding downstream 173820 55728040 ~ 55728399 (+)
AMCG00004651 NA coding downstream 297426 55851646 ~ 55857119 (+)
G9569 NA non-coding upstream 285987 55263043 ~ 55263268 (+)
G9531 NA non-coding upstream 421952 55127028 ~ 55127303 (+)
G9527 NA non-coding upstream 425738 55118993 ~ 55123517 (+)
G9526 NA non-coding upstream 432761 55115004 ~ 55116494 (+)
G9525 NA non-coding upstream 434341 55114351 ~ 55114914 (+)
G9644 NA non-coding downstream 9061 55563281 ~ 55572079 (+)
G9718 NA non-coding downstream 222568 55776788 ~ 55780421 (+)
G9721 NA non-coding downstream 234589 55788809 ~ 55789057 (+)
G9723 NA non-coding downstream 256163 55810383 ~ 55858397 (+)
G9749 NA non-coding downstream 341448 55895668 ~ 55896523 (+)
AMCG00004634 NA other upstream 89851 55376095 ~ 55459404 (+)
AMCG00004632 NA other upstream 187546 55295175 ~ 55361709 (+)
G9532 ugdh,LOC107757604 other upstream 421203 55127678 ~ 55128052 (+)
G9522 NA other upstream 474796 55074046 ~ 55074459 (+)
AMCG00004610 NA other upstream 759493 54783746 ~ 54789762 (+)
AMCG00004644 NA other downstream 13912 55568132 ~ 55605485 (+)
AMCG00004642 NA other downstream 53319 55607539 ~ 55613041 (+)
AMCG00004650 NA other downstream 204051 55758271 ~ 55801268 (+)
AMCG00004673 NA other downstream 761392 56315612 ~ 56359797 (+)
AMCG00004681 NA other downstream 935873 56490093 ~ 56499584 (+)

Expression


Co-expression Network