AMCG00004639


Basic Information

Item Value
gene id AMCG00004639
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55491168 ~ 55522237 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004639
ACTCTCTCATCACAGCCCACAATCCCAGCAGTGCTGCACAGGGACCGGGAGAGGAAGCAGGAATTGTACTGTTCAGGTCTCTGTGAAGTTACTTTCAGTCGGATCAAATGGCACTACTTTATAGAAAATGAGAAAGCTTGGCCTGAAGCCCAGAAATACTGTAGAGAAAATTATACTGATCTGTCCACTGTGGACAACCAAGAGGAACTAGACCAACTGGTAAAAATGGCTGGAGGAAATACTCCAAATGGAATGTGGATCGGACTTTATAGGGAAACACAGAACTGGCATTGGTCTAATGGACAGGAGATCATCTACTCCAACTGGAGGACACCCCTGTTCTGTGCTTTGAGCAATGCAGAAGGAAACTGGGAGGATAAAGTCTGCTATGAGACAAACCCTTTCATGTGCTTTACAGAGACCAGCAACCTCAGCCAGAGATATACCCTGGTTCAGGAGGTCAGATCCTGGGATGCAGCGCAAACGTACTGCAGAGAGCATCACACCGACCTGGTCAGCATCAACAGCCCAGAGGAAAATGAAGCTATGAGGGAGATGGCACAGGGCAGCATGTTCTGGATAGGGCTGTTCAACGATCCCTGGAAGTGGTCCGATGGGGGAAACTCATCTTTTCGGCAGTGGATTAGTAATCAGCCAAATAATAGAAACTATAATCAAAATTGTACCCATTTGGTTCAAGATGGGTTCAATGATGCTCCATGTGAGGAATCTCACTATGTCATGTGCTGTGGATACAAGTTGATCGTCAGTCTgGTATGTACTATTTCCCTAACAGCTGACAGAATGCTGCTGGTATCTCAGAGATGCCAGTATTTTTATATGATGAAGACTTGGAACGACGCACAAGCGTTCTGTCAAAATATTAACAAAGACCTGCCCACTATTTACAACATAGAAGAATTACAGCAACTCCTCAGTCTCATAGGCTCCCTGGTATCAATCCCTACATGGGTTGGACTTTACCATGATCAAAACAACTGGCAGTGGTCCAGCGAAGAGGCTTTAATCTACTCTAACTGGAAGACCCAACTCTTCTGTGCTGCAGTCAATCCAACAGGAAACTGGCTGGATTTGAACTGCAACGAGGTGCACCCATTTGTGTGCTACACAGAGACCAGCCAACCCAGCCAGAGATACACCCTGGTTCCAGATGAAAAATCCTGGGCTGACGCTCAAAGCTATTGCAGAGCGCACCACACCGACCTGGTCAGCATAGGGAACCAAGGGGAGAATGAAGCAGTGAGGGAGTCTGCACCAAATACAGTTTTCTGGATAGGGCTGTTCAACGATCCCTGGAAGTGGTCTGATGGGGGAAACTCAACGTTTCGACTATGGAACCCAAATGAACCAAATAACTGGCTGGGTGCAGAGAAATGCGTGCAGGTTCTGCAGGGAAAAATGAATGATGGATCATGTGCAACACCACTCCCCTTCTTTTGCTATGAGGAAGTGCGAGAGATGATCCTAGTGCAGCAGACTAAGACCTGGGAGGAGGCGATGGACTACTGCAGAGCTTACTACACTGACCTCACCAGCATTGTCTCACAGTTTGAGCAAAACCTCGCGGCCCCAAAGACCATGGGTGCTCAGACATCCCACGTGTGGCTGGGTCTGAGACAGAGCTTGATATCCAGATCTTGGTTCTGGGTGAATAGAGAACCTCTGCAATATGAGAACTGGAAGCAGGGAAGACAGCCCCAGTGCCCTCAGTCCAGTTACTGTGGAGCCATGTCTACTGTGGATCACCTCTGGGTTGACAGGCCCTGTGACGAGAGGCTCAACTTCATCTGTTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004639 True 1818 mRNA 0.48 7 55491168 55522237

Neighbor

gene id symbol gene type direction distance location
AMCG00004636 NA coding upstream 10112 55478946 ~ 55481056 (+)
AMCG00004635 NA coding upstream 59698 55424435 ~ 55431470 (+)
AMCG00004624 NA coding upstream 319956 55157066 ~ 55171212 (+)
AMCG00004626 NA coding upstream 336954 55150739 ~ 55154214 (+)
AMCG00004623 NA coding upstream 418087 55072497 ~ 55073081 (+)
AMCG00004638 NA coding downstream 27018 55549255 ~ 55554220 (+)
AMCG00004643 NA coding downstream 109358 55631595 ~ 55652721 (+)
AMCG00004645 NA coding downstream 149721 55671958 ~ 55681643 (+)
AMCG00004646 NA coding downstream 178784 55701021 ~ 55701617 (+)
AMCG00004647 NA coding downstream 205803 55728040 ~ 55728399 (+)
G9569 NA non-coding upstream 227900 55263043 ~ 55263268 (+)
G9531 NA non-coding upstream 363865 55127028 ~ 55127303 (+)
G9527 NA non-coding upstream 367651 55118993 ~ 55123517 (+)
G9526 NA non-coding upstream 374674 55115004 ~ 55116494 (+)
G9525 NA non-coding upstream 376254 55114351 ~ 55114914 (+)
G9644 NA non-coding downstream 41044 55563281 ~ 55572079 (+)
G9718 NA non-coding downstream 254551 55776788 ~ 55780421 (+)
G9721 NA non-coding downstream 266572 55788809 ~ 55789057 (+)
G9723 NA non-coding downstream 288146 55810383 ~ 55858397 (+)
G9749 NA non-coding downstream 373431 55895668 ~ 55896523 (+)
AMCG00004634 NA other upstream 31764 55376095 ~ 55459404 (+)
AMCG00004632 NA other upstream 129459 55295175 ~ 55361709 (+)
G9532 ugdh,LOC107757604 other upstream 363116 55127678 ~ 55128052 (+)
G9522 NA other upstream 416709 55074046 ~ 55074459 (+)
AMCG00004610 NA other upstream 701406 54783746 ~ 54789762 (+)
AMCG00004644 NA other downstream 45895 55568132 ~ 55605485 (+)
AMCG00004642 NA other downstream 85302 55607539 ~ 55613041 (+)
AMCG00004650 NA other downstream 236034 55758271 ~ 55801268 (+)
AMCG00004673 NA other downstream 793375 56315612 ~ 56359797 (+)
AMCG00004681 NA other downstream 967856 56490093 ~ 56499584 (+)

Expression


Co-expression Network