G9526


Basic Information

Item Value
gene id G9526
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55115004 ~ 55116494 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11813
TCAGACTGCCTTGCCTGTGCACATTTCTGCGGGAAACCCTGCAGTCCTCCTATAACATTCCAACAGCTTCAGAGCATCAATCTCAAAACCTGCCATGCTGGGTTTCTTTCATCCTTTACAAGTCAGGTAAGAGTTCCAGATTCCCACAACCCTTTGTGTAAAGAGCACATCAACCTCCTCTTGAGTCCCTAGGTCCTGGTTTCACTGGTGATCCAGAAGCAGAGCTCTGGGTTTGTCAAGACCTTTCGGGATTTGAAAAGGTTTTGTATAAAGTCTAGGGTTGTACATTTCAAGCAGTTGCATCTATATCTCTTTTCTCTATTCTTGTGACCATTTTCACCTTTTTCACATCTTTCTGACAGTGGGGGAAATGCGTTCTCCATTAAAAGATGTTTCGtagaaataaaatagtaaaatgcCAGTAAAACACATCCctagttttaaaattattattctaCTTCTGCATAAGGCAGTGGTTTAAATATAGTCAACATGATTCCATCATAAAAATGACCACCAAAGTACATTATATTACCAAAAGTAAAGGAAGTTAAGTCTCCTGTCCCTGCTATTGAACTCTACCAGAGGGGGGGTGTTGTGAAGGACCCCATGCCCAGccagtgcagtgttgtgatATTGGGGACCACAGGGCCCTGCCAGCACTGAGGGGGATTTACAGTGAGGGGCCCCTGTACATCTACCCACATCTACCCACCTGTCCCAGAGCTGGTAGTGGAGCACAGCGGGTTCAGGGAGAAAAGTACAGTGCTGTTAACATTTCACAACACCAATAAACCGGAACAGCAAATTAGGATAAGACCATAGTAACCAAGGTTTAATCGCCATACTAGAAAATGGAGGAATGGCACAGTTGTGCTGCCCTGGCTTAAGGGCATTCGTCACAAGGGTGGTGCTTTCACAGAGCTCTGGTATCCCAGTAATTTTGGTAACGTAGTgtgtacatttatgtattagGGATCAACACGAACCAGACgtgtttgtgattttcaaatGGCCGTGATGTATGAACActagacacagacagagaatcCGGAAGACTGTCCTGTTTTTCAGATGGATGTGAAATGCTGAGGAAACAGGAGATTTAGCATACTACAGCCTGGCACCTCCTTTGTTATACTGctgtatttgatatttttatatgtaaggTCCTGTGGCGGCCATGTTTGTGAGGGGCAGGGTTTAAAAATGCTGACCACTTACATTGAGAGGGGCAATCAGTGGCCTATTGGGATGTGTCCCTCACTGAGGCAGAGAAAGCTCTGGGGAGTAGCCGTCAGTCTCGGGTCAAGCTGAGGGAAACCAGCTGATTGCTTGTGTTTGCAATTGATTTTTTCATAAGGCACCATGGATTCTTTCTGTTTGAACCTAACTTTCTTACAAAGTCATCACAAACAGATCTGGAACTGGTTGATCCCCACTgggccatttaaaaaaacatgaatttcaaGGGTACTGCTCATAATTGTA

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU11813 True 1491 lncRNA 0.44 1 55115004 55116494

Neighbor

gene id symbol gene type direction distance location
AMCG00004623 NA coding upstream 41923 55072497 ~ 55073081 (+)
AMCG00004619 NA coding upstream 105684 55002426 ~ 55009320 (+)
AMCG00004614 tagln,LOC106567831,LOC101483357 coding upstream 141162 54964810 ~ 54973842 (+)
AMCG00004616 NA coding upstream 156046 54958320 ~ 54958958 (+)
AMCG00004612 NA coding upstream 161883 54951667 ~ 54953121 (+)
AMCG00004626 NA coding downstream 34245 55150739 ~ 55154214 (+)
AMCG00004624 NA coding downstream 40572 55157066 ~ 55171212 (+)
AMCG00004635 NA coding downstream 307941 55424435 ~ 55431470 (+)
AMCG00004636 NA coding downstream 362452 55478946 ~ 55481056 (+)
AMCG00004639 NA coding downstream 374674 55491168 ~ 55522237 (+)
G9525 NA non-coding upstream 90 55114351 ~ 55114914 (+)
G9524 NA non-coding upstream 24363 55090381 ~ 55090641 (+)
G9521 NA non-coding upstream 54700 55060090 ~ 55060304 (+)
G9464 NA non-coding upstream 312569 54801977 ~ 54802435 (+)
G9435 NA non-coding upstream 410778 54699816 ~ 54704226 (+)
G9527 NA non-coding downstream 2499 55118993 ~ 55123517 (+)
G9531 NA non-coding downstream 10534 55127028 ~ 55127303 (+)
G9569 NA non-coding downstream 146549 55263043 ~ 55263268 (+)
G9644 NA non-coding downstream 446787 55563281 ~ 55572079 (+)
G9718 NA non-coding downstream 660294 55776788 ~ 55780421 (+)
G9522 NA other upstream 40545 55074046 ~ 55074459 (+)
AMCG00004610 NA other upstream 325242 54783746 ~ 54789762 (+)
AMCG00004609 NA other upstream 336101 54768610 ~ 54778903 (+)
AMCG00004608 LOC103361032,LOC104918006,LOC103372158 other upstream 349175 54744714 ~ 54765829 (+)
AMCG00004606 NA other upstream 371999 54724756 ~ 54743005 (+)
G9532 ugdh,LOC107757604 other downstream 11184 55127678 ~ 55128052 (+)
AMCG00004632 NA other downstream 178681 55295175 ~ 55361709 (+)
AMCG00004634 NA other downstream 259601 55376095 ~ 55459404 (+)
AMCG00004644 NA other downstream 451638 55568132 ~ 55605485 (+)
AMCG00004642 NA other downstream 491045 55607539 ~ 55613041 (+)

Expression


Co-expression Network