G990


Basic Information

Item Value
gene id G990
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 5986038 ~ 5986394 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1177
accaagaaaacaattggtaacacactacgccgtgaaggactgaaatcctgcagcgcccgcaaggtccccctgctcaagaaagcacatgtacaggcccgtctgaagtttgccaatgaacatctgaatgattcagaggagaactgggtgaaagtgtcaactcaactcgccgtgtttggaggaggaggaatgctgcctatgaccccaagaacaccatccccaccgtcaaacatggaggtggaaacattatgttttgggggtgtttttctgctaaggggacaggacaacagcaccgcatcaaagggacgatggacggggccatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1177 True 320 lncRNA 0.55 2 5986038 5986394

Neighbor

gene id symbol gene type direction distance location
AMCG00003496 NA coding upstream 70446 5914471 ~ 5915592 (+)
AMCG00003497 NA coding upstream 160306 5824581 ~ 5825732 (+)
AMCG00003498 NA coding upstream 216101 5767358 ~ 5769937 (+)
AMCG00003495 NA coding upstream 232777 5752143 ~ 5753261 (+)
AMCG00003487 NA coding upstream 479131 5463759 ~ 5506907 (+)
AMCG00003500 NA coding downstream 280507 6266901 ~ 6267507 (+)
AMCG00003499 NA coding downstream 388865 6375259 ~ 6376299 (+)
AMCG00003501 NA coding downstream 634417 6620811 ~ 6646702 (+)
AMCG00003505 NA coding downstream 737136 6723530 ~ 6736370 (+)
AMCG00003506 NA coding downstream 832222 6818616 ~ 6825710 (+)
G983 NA non-coding upstream 30218 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 156293 5829459 ~ 5829745 (+)
G908 NA non-coding upstream 427523 5557607 ~ 5558515 (+)
G907 kbtbd11 non-coding upstream 429732 5550745 ~ 5556306 (+)
G752 NA non-coding upstream 1432393 4552898 ~ 4553645 (+)
G1146 NA non-coding downstream 1087010 7073404 ~ 7073609 (+)
G1187 NA non-coding downstream 1378550 7364944 ~ 7365477 (+)
G1218 NA non-coding downstream 1503051 7489445 ~ 7489881 (+)
G1241 NA non-coding downstream 1537467 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 1540465 7526859 ~ 7528458 (+)
AMCG00003480 NA other upstream 651286 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 1463638 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 1530896 4452564 ~ 4455142 (+)
G1012 NA other downstream 501298 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 1511646 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 2662731 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 2914062 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 3089496 9075890 ~ 9106765 (+)

Expression


Co-expression Network