G1855


Basic Information

Item Value
gene id G1855
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 11050151 ~ 11050644 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2211
ttcctgtgttttcatgcatagttgagtcgcttggccttgttgccacgtcggaggaatgactttttggctgcaagtcttccatgaaggccacttctgagcagacttctctggacagtagatagGTGTATCaaggtcccactgttttctgccaattctgagctgatggcactgctggacatcttccgattgcaaagaGAAGtcagcatgatgtgtctttcatctgctgcagtaagtttccttggccaaccacttgctgtgctcagtcttgccatggtgtttgacttttgacagtaaactgtcttcagcaacctcaccttgttagctgagtctggctgttcctcacccagttttattcctcctacacagctgttagtttcagttaatgattgtgtttcaacctacatattgaattgatgatcattagcacctgtttgctataattgtttaatcatatgACTGactatgcctacaaaatccctgactttgtgcaagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211 True 494 lncRNA 0.44 1 11050151 11050644

Neighbor

gene id symbol gene type direction distance location
AMCG00003591 NA coding upstream 1575 11025209 ~ 11048576 (+)
AMCG00003585 NA coding upstream 392578 10636488 ~ 10657573 (+)
AMCG00003590 NA coding upstream 418671 10629573 ~ 10631480 (+)
AMCG00003583 crnkl1,LOC106607683,LOC106571265 coding upstream 426779 10617557 ~ 10623372 (+)
AMCG00003581 ralgapa2 coding upstream 518066 10506558 ~ 10532085 (+)
AMCG00003594 LOC106565365,LOC106610693 coding downstream 33519 11084163 ~ 11098960 (+)
AMCG00003593 myo6b coding downstream 56750 11107394 ~ 11132470 (+)
AMCG00003598 NA coding downstream 211089 11261733 ~ 11273160 (+)
AMCG00003599 NA coding downstream 265557 11316201 ~ 11343024 (+)
AMCG00003603 NA coding downstream 398676 11449320 ~ 11460063 (+)
G1747 ralgapa2 non-coding upstream 592386 10431664 ~ 10457765 (+)
G1706 NA non-coding upstream 811890 10236856 ~ 10238261 (+)
G1574 NA non-coding upstream 1346673 9700557 ~ 9703478 (+)
G1430 ywhaqb,ywhaq,LOC105896734,LOC108436740,LOC107733143,LOC107674035,LOC107752793 non-coding upstream 2022519 9009297 ~ 9027632 (+)
G1375 NA non-coding upstream 2206069 8843827 ~ 8844082 (+)
G1891 NA non-coding downstream 177315 11227959 ~ 11228275 (+)
G1902 NA non-coding downstream 280395 11331039 ~ 11403029 (+)
G1987 NA non-coding downstream 519408 11570052 ~ 11570410 (+)
G2018 NA non-coding downstream 762478 11813122 ~ 11831420 (+)
G2027 NA non-coding downstream 855339 11905983 ~ 11906188 (+)
AMCG00003570 NA other upstream 1268395 9777508 ~ 9781756 (+)
AMCG00003551 NA other upstream 1786683 9255828 ~ 9263468 (+)
AMCG00003544 NA other upstream 1943386 9075890 ~ 9106765 (+)
AMCG00003541 asap2,LOC106566627 other upstream 2108400 8900456 ~ 8941751 (+)
AMCG00003534 id2,LOC106566577 other upstream 2397681 8649125 ~ 8652470 (+)
AMCG00003604 NA other downstream 411019 11461663 ~ 11482931 (+)
AMCG00003606 NA other downstream 439541 11490185 ~ 11491597 (+)
G1989 cnr1,LOC104936193 other downstream 523087 11573731 ~ 11577329 (+)
AMCG00003614 NA other downstream 674439 11725083 ~ 11729991 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other downstream 1851922 12902566 ~ 12917002 (+)

Expression


Co-expression Network