G2324


Basic Information

Item Value
gene id G2324
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13414861 ~ 13415156 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2820
ttttattgcttcccttaatggcaggcacagcgtcaaaaagcaaaacaaaacctagctctgtccgagcactaactaaacgtcaacaatccctaactacaaaacaaacactaacaataacagtaaatgcccgggtcggtagagccgaacaccgggcaaacagaagcacgacaggggcaaggcaggttcgtagtcacagtccgtaatcaaagttcgttaccagTGGGAgtttgtcagacagtccggggttcaagagggagaatggtccaggtccagaaaaagggtcgcAAGCCAGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2820 True 296 lncRNA 0.48 1 13414861 13415156

Neighbor

gene id symbol gene type direction distance location
AMCG00003663 NA coding downstream 16014 13387807 ~ 13398847 (-)
AMCG00003659 adcy3,LOC107688975 coding downstream 97963 13290299 ~ 13316898 (-)
AMCG00003657 NA coding downstream 131347 13281451 ~ 13283514 (-)
AMCG00003658 wdr26,LOC103044372 coding downstream 144616 13251098 ~ 13270245 (-)
AMCG00003661 NA coding downstream 178814 13234073 ~ 13236047 (-)
AMCG00003664 tgfb2 coding upstream 94635 13509791 ~ 13514900 (-)
AMCG00003665 NA coding upstream 130195 13545351 ~ 13562197 (-)
AMCG00003677 LOC107733121,LOC107582237 coding upstream 923270 14338426 ~ 14354533 (-)
AMCG00003685 NA coding upstream 972399 14387555 ~ 14394904 (-)
AMCG00003686 cdc42bpa coding upstream 1011129 14426285 ~ 14461583 (-)
G2291 xdh,LOC107752765,LOC107592779,LOC107733164,LOC107674096 non-coding downstream 177868 13233495 ~ 13236993 (-)
G2287 NA non-coding downstream 236689 13172632 ~ 13178172 (-)
G2285 NA non-coding downstream 271333 13131620 ~ 13143528 (-)
G2266 NA non-coding downstream 313543 13100512 ~ 13101318 (-)
G2257 NA non-coding downstream 334840 13077648 ~ 13080021 (-)
G2337 NA non-coding upstream 92736 13507892 ~ 13508930 (-)
G2443 fzd3b,LOC107729283,LOC107734193,LOC107665105,LOC107589599,LOC108270052 non-coding upstream 994080 14409236 ~ 14410253 (-)
G2444 LOC108270052,LOC108428681 non-coding upstream 1000223 14415379 ~ 14415673 (-)
G2445 NA non-coding upstream 1003422 14418578 ~ 14419732 (-)
G2447 NA non-coding upstream 1005575 14420731 ~ 14421315 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 298201 13071796 ~ 13116660 (-)
G2236 NA other downstream 379372 13034953 ~ 13035489 (-)
AMCG00003625 NA other downstream 1336709 12075319 ~ 12078152 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 1475078 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 1625586 11743989 ~ 11789275 (-)
AMCG00003667 NA other upstream 249587 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 594302 14009458 ~ 14013021 (-)
G2500 NA other upstream 1395630 14810786 ~ 14811331 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 2100517 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 3192254 16607410 ~ 16628401 (-)

Expression


Co-expression Network