Gene
RNA
| Item | Value |
|---|---|
| gene id | G7135 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 41587199 ~ 41587456 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU8729 | True | 258 | lncRNA | 0.45 | 1 | 41587199 | 41587456 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004290 | NA | coding | downstream | 114159 | 41469364 ~ 41473040 (-) |
| AMCG00004288 | rab10,LOC102798439 | coding | downstream | 145015 | 41438900 ~ 41442184 (-) |
| AMCG00004287 | NA | coding | downstream | 160807 | 41387789 ~ 41426392 (-) |
| AMCG00004285 | NA | coding | downstream | 212250 | 41366801 ~ 41374949 (-) |
| AMCG00004283 | tfap2d,LOC107690996,LOC107593304,LOC107721448 | coding | downstream | 338725 | 41238427 ~ 41248474 (-) |
| AMCG00004306 | otof | coding | upstream | 514233 | 42101689 ~ 42108599 (-) |
| AMCG00004307 | otof | coding | upstream | 531197 | 42118653 ~ 42150175 (-) |
| AMCG00004310 | LOC107549081 | coding | upstream | 745768 | 42333224 ~ 42336612 (-) |
| AMCG00004311 | tcp1,LOC107669694,LOC107694622 | coding | upstream | 768095 | 42355551 ~ 42361988 (-) |
| AMCG00004312 | NA | coding | upstream | 777311 | 42364767 ~ 42366935 (-) |
| G7131 | NA | non-coding | downstream | 4432 | 41582461 ~ 41582767 (-) |
| G7130 | NA | non-coding | downstream | 12739 | 41574249 ~ 41574460 (-) |
| G7117 | NA | non-coding | downstream | 126878 | 41459809 ~ 41460321 (-) |
| G7115 | hadha,hadhab,LOC108425650,LOC106603767,LOC105898013,LOC100304971 | non-coding | downstream | 200643 | 41384720 ~ 41386556 (-) |
| G7104 | NA | non-coding | downstream | 223134 | 41294176 ~ 41364065 (-) |
| G7137 | NA | non-coding | upstream | 9203 | 41596659 ~ 41597449 (-) |
| G7138 | NA | non-coding | upstream | 13969 | 41601425 ~ 41602601 (-) |
| G7148 | NA | non-coding | upstream | 36476 | 41623932 ~ 41642726 (-) |
| G7192 | NA | non-coding | upstream | 397787 | 41985243 ~ 42024740 (-) |
| G7243 | NA | non-coding | upstream | 500348 | 42087804 ~ 42089627 (-) |
| G6792 | hs90b,hsp90bb,hsp90ab1 | other | downstream | 1738076 | 39841935 ~ 39849123 (-) |
| AMCG00004203 | NA | other | downstream | 4205246 | 37324010 ~ 37381953 (-) |
| G6441 | NA | other | downstream | 4218377 | 37367985 ~ 37368822 (-) |
| AMCG00004188 | srp9,LOC107553440,LOC107601484 | other | downstream | 4800077 | 36783743 ~ 36787122 (-) |
| AMCG00004189 | NA | other | downstream | 4808137 | 36769048 ~ 36779062 (-) |
| AMCG00004302 | NA | other | upstream | 477533 | 42064989 ~ 42067664 (-) |
| AMCG00004313 | NA | other | upstream | 789270 | 42376726 ~ 42531006 (-) |
| AMCG00004336 | NA | other | upstream | 1815497 | 43402953 ~ 43450255 (-) |
| G7608 | NA | other | upstream | 2933458 | 44520914 ~ 44522213 (-) |
| AMCG00004364 | NA | other | upstream | 2952707 | 44540163 ~ 44561575 (-) |
