G7879


Basic Information

Item Value
gene id G7879
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46390388 ~ 46390751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9695
atcagccataacattatgaccactgacaggtgaagtgaacaacactgataatctcgatatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacatttcgtcctcaaagttgatgtgctagaagcaggaaaaatgggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggctagacaactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcgatgaaccggcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcaaaggctggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9695 True 364 lncRNA 0.50 1 46390388 46390751

Neighbor

gene id symbol gene type direction distance location
AMCG00004389 NA coding upstream 71081 46300852 ~ 46319307 (+)
AMCG00004390 thyn1 coding upstream 101143 46285450 ~ 46289245 (+)
AMCG00004388 NA coding upstream 135997 46236357 ~ 46254391 (+)
AMCG00004387 msantd2,LOC107588693 coding upstream 202981 46180538 ~ 46187407 (+)
AMCG00004384 NA coding upstream 391280 45981625 ~ 45999108 (+)
AMCG00004397 igsf9b,LOC108427954 coding downstream 237067 46627818 ~ 46657794 (+)
AMCG00004396 igsf9b coding downstream 279223 46669974 ~ 46681968 (+)
AMCG00004395 NA coding downstream 297849 46688600 ~ 46702427 (+)
AMCG00004401 arhgap32b,LOC107715324,LOC107703512 coding downstream 402636 46793387 ~ 46797648 (+)
AMCG00004400 NA coding downstream 478574 46869325 ~ 46882912 (+)
G7765 NA non-coding upstream 468583 45919390 ~ 45921805 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding upstream 1772989 44616316 ~ 44617399 (+)
G7644 NA non-coding upstream 1802404 44587706 ~ 44587984 (+)
G7638 NA non-coding upstream 1815391 44574331 ~ 44574997 (+)
G7614 NA non-coding upstream 1847245 44530340 ~ 44543143 (+)
G7906 NA non-coding downstream 325027 46715778 ~ 46717255 (+)
G7911 NA non-coding downstream 331078 46721829 ~ 46723088 (+)
G7949 NA non-coding downstream 601466 46992217 ~ 46997805 (+)
G7974 NA non-coding downstream 1257437 47648188 ~ 47648574 (+)
G7977 NA non-coding downstream 1294769 47685520 ~ 47685881 (+)
AMCG00004380 NA other upstream 422082 45962010 ~ 45968306 (+)
AMCG00004355 hyou1,LOC100380749 other upstream 1749656 44618185 ~ 44640732 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 3699279 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 4174026 42210430 ~ 42216362 (+)
G7094 NA other upstream 4883157 41459576 ~ 41507231 (+)
G7999 NA other downstream 1756137 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 2506366 48897117 ~ 49026355 (+)
G8099 NA other downstream 2541699 48932450 ~ 48934095 (+)
AMCG00004424 NA other downstream 2652839 49043590 ~ 49060055 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other downstream 2907985 49298736 ~ 49318835 (+)

Expression


Co-expression Network