AMCG00005772


Basic Information

Item Value
gene id AMCG00005772
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9572937 ~ 9580695 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005772
ATGCTGGGGTCCTTGTATTTTCAGACTCTGCATATTGGCTCTAGATGGTCTGAGCTGAGCCCCGGTCCCTTCACAGAGGGTTTTCCAGGATCAGGGCCGGAGATCCACGGCTGCTCAACCCTCGCCGTCACATTGAACAAGAAGCAACACGCCCTGGCTCACACCTTCCTAAATATGATATTGAATCTGCGCTGCTTGTGTGGTGTGGTGCTGGCCTTGGTTCAGATGTGTCCCAGGGACCCTGACCTGCTGGCCGCACGAACAGCCCCGCCCCTCCGCCGCTGTTCCGGGCAGCAGACCTCCTCCCCCAACAGTAAGAGTTTATGTGCTGTGGGCGCTTCAGGATCCAGCGCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005772 True 357 mRNA 0.58 3 9572937 9580695

Neighbor

gene id symbol gene type direction distance location
AMCG00005771 NA coding downstream 37667 9521298 ~ 9535270 (-)
AMCG00005773 NA coding downstream 64401 9500028 ~ 9508536 (-)
AMCG00005766 NA coding downstream 93091 9475577 ~ 9479846 (-)
AMCG00005765 NA coding downstream 109876 9439061 ~ 9463061 (-)
AMCG00005785 LOC106613037,LOC105023190,LOC106581166,LOC108431344,LOC105896252 coding downstream 201515 9350434 ~ 9371422 (-)
AMCG00005770 NA coding upstream 7104 9587799 ~ 9589780 (-)
AMCG00005780 LOC103366110 coding upstream 28396 9609091 ~ 9625629 (-)
AMCG00005782 NA coding upstream 53089 9633784 ~ 9639483 (-)
AMCG00005781 NA coding upstream 92995 9673690 ~ 9679085 (-)
AMCG00005769 NA coding upstream 257462 9838157 ~ 9860924 (-)
G154280 NA non-coding downstream 29 9572215 ~ 9572908 (-)
G154260 NA non-coding downstream 135038 9435880 ~ 9437899 (-)
G154237 NA non-coding downstream 179604 9343755 ~ 9393333 (-)
G154235 NA non-coding downstream 240904 9331343 ~ 9332033 (-)
G154234 git1 non-coding downstream 242404 9325522 ~ 9330533 (-)
G154391 NA non-coding upstream 508859 10089554 ~ 10091616 (-)
G154399 NA non-coding upstream 556733 10137428 ~ 10138925 (-)
G154400 NA non-coding upstream 563788 10144483 ~ 10144931 (-)
G154575 NA non-coding upstream 995275 10575970 ~ 10576502 (-)
G154642 NA non-coding upstream 1109453 10690148 ~ 10693965 (-)
G154250 NA other downstream 137997 9425290 ~ 9434940 (-)
G154142 NA other downstream 480364 9090422 ~ 9092573 (-)
G153806 NA other downstream 1448252 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 1571532 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 1784616 7785554 ~ 7788321 (-)
AMCG00005850 NA other upstream 714904 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 962839 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 1157849 10738544 ~ 10752114 (-)
G154677 ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 other upstream 1263146 10843841 ~ 10912745 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other upstream 1268820 10849515 ~ 10865796 (-)

Expression


Co-expression Network