AMCG00006124 (csnk1g2,LOC106925954,LOC106953035,LOC102231174,LOC104921814,LOC103359437)


Basic Information

Item Value
gene id AMCG00006124
gene name csnk1g2,LOC106925954,LOC106953035,LOC102231174,LOC104921814,LOC103359437
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 17450573 ~ 17468843 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006124
GAACCGATAAAGTCCAGGGCGCCGCAGCTGCATTTGGAGTACAGATTTTACAAACAGCTGGGAAGTTCAGAGGGCATTCCTCAGGTGTACTACTTTGGCCCATGTGGGAAATACAATGCCATGGTCCTGGAGCTCCTGGGGCCCAGCCTGGAGGATCTCTTTGATATCTGCGACAGAACCTTCTCCCTCAAGACTGTCCTGATGATAGCCATACAGTTGATCACGCGGATGGAGTATGTACATACCAAAAGCTTGATATACAGAGATGTCAAGCCGGAAAATTTCCTGGTGGGTAGGCCAGGCAGCAAACGGCAGCACACAATCCACATCATCGACTTCGGCCTGGCCAAAGAATACATCGACCCCGAGACCAAAAAACACATCCCCTACCGGGAGCACAAAAGCCTGACGGGCACTGCACGATATATGAGCATTAACACGCACCTGGGGAAAGAACAAAGCAGGAGGGATGACCTGGAAGCCTTGGGACACATGTTCATGTACTTTCTTCGAGGCAGCCTCCCCTGGCAGGGCTTGAAGGCTGATACATTGAAGGAGAGGTATCAGAAAATTGGAGATACTAAACGAGCGACGCCAGTTGAAGTGCTATGTGAAACCTTTCCAGAGGAAATGGCCACGTATCTGCGCTATGTGAGGAGGCTGGACTTCTTCGAAAAACCAGACTATGACTACTTAAGGAAACTCTTCACTGACCTCTTTGACAGGAACGGCTATGTTTTCGATTACGAATATGACTGGGTTGGGAAGACGCTTCCCACCCCCATCGGCCCTGTCCACAGTGACAACCCCCTGCCGCCTAGCAGCAGAGACAAAGCACAACAACAGACCAAAAACCAGTCGCCTGAGCTCAAAGGAACCTGTGAGTCCCAGCCCACTCCAGTGACCAATAGGGAGCTCCTGGGGTCTCATCTCACAGCTGATAGGCTCGGGGGCTCTGTTCAGGTAATGAGCTCGACAAACGGGGAGCTGAACACTGATGACCCTACTGCAGGACACTCCAATGCTCCCATCACAGCGCCGGCCGAAGTGGAAgtgCTGCTGTTTCTtcaagaggaggaagaggaaagcTCTTCAACGGCACAAGTGAAGGGGAGATCCCATGAGAACTGATACACTCTGGTCACTGTCGAGTTTTAAATGGACGCAAATGCAAAACCCATCTCACGTTGGCAGACGCACCTCAGTTGTGTGCAAAGGAACGTTACTTTCACTCTCGCCAAGTGGGAATATGGACTTCTggttcctttttaaaaaaaaatatatatatatgaaaaaaattaaaataactaaacaaataccGGACACAAAATACCTACATGAAAAGATGCTGTTTCTACATTGCTGTATTCTAGAATCCACACACAAAGCATTAACTGTACACACCCCCATTGactggtggaaaaaaaaaaaaaaatcttctccaTAGAACTAGTTCTAATTGTGGGAtcaaagcaagaaagaaaatgtactaATGACAACCCAAAAATCACTGCGAGGAAAGCACGAACTTCATCTGCATCAGAGTCGGACGATTTTATGTAAAttcttttcccttttatttttttctaatttaaatttatgTTGTTAAAGGTCGACTCTCTGAGTTGGAATGAACTTTTACTTTCATGTGTAGTGTtctggaattcatttttttttttctgtcaatgTGGACTTTGTAGCACAGTCACTGGCCTCAGGTACTGTGGAAGAATGAGAGAATATAAATCTCTTCTTTATATTGcacttttggaaaaaaaaaaaaagagaagtacGGAATTCTGGGcttgaaattaacaaaaaaataaagactgatcTAGGAATATTCCTAAATAATGGTGATCTCTGTATAAGGGCGAATGTTGTCCACTCAAATGTCTCTTCAATTTTATTTCTCGCATCAGAAAACTTACCAGGAATCATAGCTTGTGCctttgaaagtaaaatgtttaaagctCAAGTGTCCCGCAATCAAGTTttatctgaaatattttttttgttgtggttaaaaaaaaggtttttcaCCTTGTGATCGGTGCTATCACACTGTTTGAGATGTGACGATACACTGAATGTTACTGCTTGTGTCATTGGGAATCATTTTGTAGATGGGGACCTAGTCTCACAAGCGTAAACTGAC

Function

symbol description
csnk1g2 Enables protein serine/threonine kinase activity. Involved in peptidyl-serine phosphorylation. Located in membrane.

NR:

description
PREDICTED: casein kinase I isoform gamma-2 isoform X1

GO: NA

KEGG:

id description
K08958 CSNK1G; casein kinase 1, gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006124 True 2158 mRNA 0.44 10 17450573 17468843

Neighbor

gene id symbol gene type direction distance location
AMCG00006123 NA coding downstream 7742 17424838 ~ 17442831 (-)
AMCG00006122 nfic,LOC107585880 coding downstream 168974 17273785 ~ 17281599 (-)
AMCG00006121 nfic,LOC106613851 coding downstream 224688 17187308 ~ 17225885 (-)
AMCG00006152 fzr1,fzr1a coding downstream 355925 17083964 ~ 17094648 (-)
AMCG00006153 NA coding downstream 398821 17036827 ~ 17051752 (-)
AMCG00006137 NA coding upstream 52981 17521824 ~ 17523344 (-)
AMCG00006157 NA coding upstream 75663 17544506 ~ 17558968 (-)
AMCG00006155 mknk2,LOC107731184,LOC107695256,LOC107585877 coding upstream 98853 17567696 ~ 17587595 (-)
AMCG00006154 LOC101067073,LOC104921817,LOC103368804,LOC108238466,LOC103137270 coding upstream 128879 17597722 ~ 17612378 (-)
AMCG00006156 LOC108439652,LOC108264986 coding upstream 152040 17620883 ~ 17638982 (-)
G156378 NA non-coding downstream 527710 16865098 ~ 16922863 (-)
G156344 NA non-coding downstream 774526 16674798 ~ 16676047 (-)
G156228 NA non-coding downstream 1379045 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 1387501 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 1450534 15994787 ~ 16000039 (-)
G156668 NA non-coding upstream 663486 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 669676 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 964763 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1063219 18532062 ~ 18532447 (-)
G156717 NA non-coding upstream 1064340 18533183 ~ 18538243 (-)
AMCG00006127 NA other downstream 486923 16947997 ~ 16963650 (-)
G156341 NA other downstream 769801 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 928884 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 988408 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 1493483 15954076 ~ 15957090 (-)
G156907 NA other upstream 1806357 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 1980088 19448931 ~ 19463205 (-)
G157059 NA other upstream 3240956 20709799 ~ 20712216 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location