AMCG00006137


Basic Information

Item Value
gene id AMCG00006137
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 17521824 ~ 17523344 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006137
ATGGCTGTGATTTACGATCTTCACCAGCAGGTGGCGGAACAGTATCCGATTAGCCCGACCAGCGGCCCGCCCTCCACTCTCCATGCATTCTCCGTGGCTGAGAGACTAGCAGAGCTTATTCTGGAGGCACGCTACGGTAACCAGCAGAAGCAGCGCAGGAGCCGCACGGCCTTCACAGTGCCGCAGCTCCAGGCCCTGGAGAAGGCCTTCCAGCAGACGCACTACCCCGACGTGGGCATGAGGGAGAGGCTGGCCGTCTGCATCAACCTCCCTGAGGCCCGCATACAGGTCTGGTTCAAGAACAGGCGAGCCAAGTTTCGCAAGGGCCAGCGGTCTGCCCCGCTCAGGGAGCAAGAGGATGAGGAGGCGGAGAGGAGGCCGGCAGGGGAAGGGAACGCCGGGACCAATGTGACAGACTCCAAAATCTCTAAGGGGGTTGCTTCCTCCAGGAGCCTCTGTGGGAGTAGTCAGCTTTCCAGGCACAGGGAGCCAGGGCCCCAGCTACACATGGGCATGCACAGTTCTCCCACCTCCCGCTTTCTGGGGGGGGGCGTGGCCAGCGATCACATGAGTCTCCTCTCGACAGGTCTACATTTGAGCCCTGCTTTTTGGCCGGCCTTTCAGCAGCCCTGCACAATTCCCGGCATCCACTCACAAGGGAAAACCCACAGCCTGAGCCTAGAGACACACTTCGACCTCAAGGTGTGCCATAGCAACGGTGCCAAGCTGTAG

Function

GO:

id name namespace
GO:0051301 cell division biological_process
GO:0044428 obsolete nuclear part cellular_component
GO:0016592 mediator complex cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006137 True 732 mRNA 0.61 3 17521824 17523344

Neighbor

gene id symbol gene type direction distance location
AMCG00006124 csnk1g2,LOC106925954,LOC106953035,LOC102231174,LOC104921814,LOC103359437 coding downstream 52981 17450573 ~ 17468843 (-)
AMCG00006123 NA coding downstream 78993 17424838 ~ 17442831 (-)
AMCG00006122 nfic,LOC107585880 coding downstream 240225 17273785 ~ 17281599 (-)
AMCG00006121 nfic,LOC106613851 coding downstream 295939 17187308 ~ 17225885 (-)
AMCG00006152 fzr1,fzr1a coding downstream 427176 17083964 ~ 17094648 (-)
AMCG00006157 NA coding upstream 21162 17544506 ~ 17558968 (-)
AMCG00006155 mknk2,LOC107731184,LOC107695256,LOC107585877 coding upstream 44352 17567696 ~ 17587595 (-)
AMCG00006154 LOC101067073,LOC104921817,LOC103368804,LOC108238466,LOC103137270 coding upstream 74378 17597722 ~ 17612378 (-)
AMCG00006156 LOC108439652,LOC108264986 coding upstream 97539 17620883 ~ 17638982 (-)
AMCG00006134 slc39a3,LOC106573935,LOC106613601 coding upstream 294177 17817521 ~ 17826232 (-)
G156378 NA non-coding downstream 598961 16865098 ~ 16922863 (-)
G156344 NA non-coding downstream 845777 16674798 ~ 16676047 (-)
G156228 NA non-coding downstream 1450296 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 1458752 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 1521785 15994787 ~ 16000039 (-)
G156668 NA non-coding upstream 608985 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 615175 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 910262 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1008718 18532062 ~ 18532447 (-)
G156717 NA non-coding upstream 1009839 18533183 ~ 18538243 (-)
AMCG00006127 NA other downstream 558174 16947997 ~ 16963650 (-)
G156341 NA other downstream 841052 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 1000135 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 1059659 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 1564734 15954076 ~ 15957090 (-)
G156907 NA other upstream 1751856 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 1925587 19448931 ~ 19463205 (-)
G157059 NA other upstream 3186455 20709799 ~ 20712216 (-)

Expression


Co-expression Network