G153859


Basic Information

Item Value
gene id G153859
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8345678 ~ 8351749 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193795
taaacatactggACAATTAGATCTAAATGCAGCCCAAAATGTACAGGCGATATATAACTTAAACTTTCTCCATAGGgaaaacacacaattttatatatataatatcaatgCGGAAAGAGAGGTCTGTAAAGTTGCCCCCATGgtttacagtactgtacatggtcccagaaaaaaattaaaaagaaaaagaaaactcaacaTTTAAACAGGAGAATCAGCAATCTACATGCAAAAAACAGGCAACagtaaaatcttaaaatatatatatacgtgtgtgtgtatatatatatatatatatatatatatatatatatatacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193795 True 321 lncRNA 0.29 2 8345678 8351749

Neighbor

gene id symbol gene type direction distance location
AMCG00005705 LOC108424102,LOC106612835,LOC101169222 coding upstream 4319 8327061 ~ 8341359 (+)
AMCG00005707 NA coding upstream 70334 8247708 ~ 8275344 (+)
AMCG00005708 NA coding upstream 115088 8216790 ~ 8230590 (+)
AMCG00005709 NA coding upstream 129028 8201620 ~ 8216650 (+)
AMCG00005731 NA coding upstream 243771 8101296 ~ 8101907 (+)
AMCG00005721 vps53 coding downstream 156296 8508045 ~ 8523947 (+)
AMCG00005719 NA coding downstream 199356 8551105 ~ 8558820 (+)
AMCG00005736 NA coding downstream 248011 8599760 ~ 8602730 (+)
AMCG00005737 NA coding downstream 263616 8615365 ~ 8615952 (+)
AMCG00005735 NA coding downstream 310058 8661807 ~ 8667423 (+)
G153816 NA non-coding upstream 67604 8251301 ~ 8278074 (+)
G153747 NA non-coding upstream 457898 7887566 ~ 7887780 (+)
G153702 NA non-coding upstream 984361 7360384 ~ 7361317 (+)
G153689 NA non-coding upstream 1047166 7298154 ~ 7298512 (+)
G153687 NA non-coding upstream 1048297 7297134 ~ 7297381 (+)
G153955 NA non-coding downstream 378054 8729803 ~ 8730155 (+)
G154025 NA non-coding downstream 430240 8781989 ~ 8805304 (+)
G154030 NA non-coding downstream 442078 8793827 ~ 8796424 (+)
G154091 NA non-coding downstream 670201 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 742160 9093909 ~ 9094670 (+)
G153815 NA other upstream 115088 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 557807 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1011107 7307058 ~ 7334571 (+)
G153675 NA other upstream 1079707 7260677 ~ 7265971 (+)
AMCG00005663 NA other upstream 1683198 6608643 ~ 6662480 (+)
AMCG00005720 NA other downstream 146753 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 476829 8828578 ~ 8854100 (+)
G154251 NA other downstream 1084151 9435900 ~ 9438269 (+)
G154283 NA other downstream 1236053 9587802 ~ 9589798 (+)
G154330 NA other downstream 1529633 9881382 ~ 9883955 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location