G154756


Basic Information

Item Value
gene id G154756
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11083161 ~ 11086011 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194931
AGCATgtttgtagtatttatttagatttttttttttttttaaacacttaaattaTACATTCAGTCCACATGGTATACTCAGGCAGAAaaggacaaaaatatatatataaaaaaagcctTTGAATTGGATCAATGCTACCTACACTGCTGAAGTGGGGATTTGGACACACGTACCACAGACATGATTCTGCTGGAGTCTGATTTACAATCAGTGGTTGTGTGGCAGAagaaaattagaaatgtaaacaaaaaaaaaaacatactaaaagaaaattagaaaaagaagaaaacctaATCCAGCATGATGATGCGGGAACGCACCTCCGTCCATCCCTTTACAGAACTGTGCCTCTCCCACTCGTGTGCAAGAGCTCATCCAGTGTGTATacaggcgtgtgtgtgtatttaacagGACATCGCACGGAGCAGTGTAcgacacacaaaacacagcagccaACTCCCTTCGACAAGATCAGCGGATCACGGCTAGAGAGAACGTGTTTTCAAGCCTCTGAAGTCTgcatgtttgcatgtgtgtgtgtgtatatataatcttataTACACAAACTTATCAGAGGGACAGAATCGGTCTTGTGTATGACAATGCGAGTGAGTCAATGAAAAACCCCTCTCAGGCTCCTTAAATGTCTTAAAGAGTCTAGGAACAAAACTGGGAGTGGGATCTGTCCTGCATCCTGAGCGCACTGTCCCAGCTGTGAGTCTCAGCGGACTCAGCCCAGCGCGGGGGAGTCGGCACCACGGGAAGTGAGGGGAACGCAAGTACTGTGTGTAATACAACTGCTTCTGCAGCAGCTTAAGTATTATTTAGGCATGGAGTTCAGGGTTCGTTTTGCTGCCTGGCCACGGCAACTGGTTTGTCTCTCTGtacatcaatttaaaaacaaaacaaaaaacccaaaccGACACAAAAGACAagcaccaccccaccccccacacacacacacacacacaatatatcacaatattcttaaaaaactaaaatatcatCTATGCTGCCCCCAGGGAATATAGACcccaaccaaaacaaacaaaccagctAGCCAACCAAGACAAAAAAAGATCAaggtaattattataatttctgtcCTTGAACAGATCGCCCGGCGCAGCTCTCGCAGAGACGACATTTCATACGGGAATCATCTCCACCCATGACTCATTTCCGAACAACAcaagagagaagaaacaaaataaacaaaacaaaaaaaaacgaatcaAGGTACATATATACACCACGTTACTGATCTGTGAAAGCATGGCACACCTCCACTATGTGCCAAGCACAGTGGGGTTAATCTGTACAGCACTGTCTGAATACTGACGATGCCAGGATTAGCGTTTGGATACAACTGTAACTGCCCCCTACTCTCCTGCAGTGCCTCTCCCACACAATCCTGTTTCTGCTACTGGCTTCACCAAGAGCCTGCTTCGCACGGGTGGTGCCTCCTACAGGTGCCATCCGTGTTTGGGAATTCAAGGTCTTTTCGACGGCTAGCAGCTGTTTGCACACAGCCAGCCAGTGTGTCAGCTGGGGAAAAGGGGCTGGAGGACCCAGGCCGCCgtgattttttgtttctccGCATACAAGTCTCCGTTGAGGACGAGTTCTCCACCCTACAGAGCCATGTCCTCTTGACGGAGTGTTTTCCCAACAGCCTTGGGAAAACTCGGGGTCAGATCGTCAACAAGTCCACTACGACCGCAAATCTGAAGTCCACCAGGGTAGTGGACACGTTAGTTGACCGCGTTTAAAGTTTCTGTGAAAAAGAAGCTGTAAGAccttcaataataaaaattaatttaaaaaagaaattgaaattaataagTACATGCAGGTATAACAGAGCAGTCTGCggaagtttatatatattaaacaaaaaaagtaatataaaaaaagacattctgCTTTTGCTGGCGATCTGAGCTGCCCAACCCGACACCGAAGAAACTCGAGACTCACAGCATCGTTCTGAGTTACTGGGAAAAAacctcaaaataaattaaagacgGGCGAGATAATGATCACAGACCCGTCCCTGTCCCCCTTCTCTTGCGCTTAATTCGAGAGGAGAGGCGGTGAGGCCTGCCAGGGGGCTGGGAAGGGCTGGGGGCGGCACATAGAATAGGAGCTCCAGTAGAGGGCAGAAGTGTGATAATTAAGAGGAAATAATTGTAACAAATGTCCAACATTAAAgccagtttttatttgtacacaTGTAGGTTGATCTAGACGTCCCTactttaaatatagattttctCTATAATATGTTGTACTCGTCTCCCCTCTTAACCCCTCATAACTctcattgtgtatttaaatggacaGAACAGCGTTCGACATTTGACTTGGCTGGTTAATACTCTCTAGCTGGGCAGTAACACACAGCGCTCACTGACTTCTgctgggactgggactgggactggggCCTGAGCCAGGACTGGATTAGGGCCGGAACCagattggggtgggggggtgataGGACACAGGtggatggaaaagaaaaagaacaataatgaaaaagaaaaacctgtctaagtggttgtgtgtgtgagagagagacggagggcagaggaaaacagtgtgtgtgagagagagatttgggggggggttgtgtgcgaTGTGTGAGAGATCCGGGTGCATACAGGCAGACagacatagacagacagacagacagacgggctGCAGCTCAGACAGCTGTGCGGGTGGGAGTGCTGGGCTGGTTCAGGTTCATGGTTTTGCACAACCAGCCTGCAAAGTCCACTTCTTCCACCTCTGAGCGCTTGATGAATGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194931 True 2814 TUCP 0.45 2 11083161 11086011

Neighbor

gene id symbol gene type direction distance location
AMCG00005869 unc13a coding upstream 120474 10929794 ~ 10962687 (+)
AMCG00005868 NA coding upstream 159614 10919948 ~ 10923547 (+)
AMCG00005867 eef2b,ef2,LOC106613766,LOC107552698 coding upstream 170489 10906357 ~ 10912672 (+)
AMCG00005826 sirt6,LOC107667852 coding upstream 196914 10882619 ~ 10886247 (+)
AMCG00005833 NA coding upstream 236303 10845536 ~ 10846858 (+)
AMCG00005813 NA coding downstream 6820 11092831 ~ 11097368 (+)
AMCG00005812 NA coding downstream 12398 11098409 ~ 11103223 (+)
AMCG00005815 LOC105011560,LOC106515027,LOC106613776,LOC103149819,LOC103463645 coding downstream 53787 11139798 ~ 11140832 (+)
AMCG00005816 LOC106613776,LOC100708007,LOC103354199,LOC102796955 coding downstream 85003 11171014 ~ 11172074 (+)
AMCG00005854 LOC108270825,LOC105011562,LOC103046807,LOC108438768,LOC102210929,LOC108247476,LOC101470054,LOC105929969 coding downstream 119376 11205387 ~ 11206589 (+)
G154722 NA non-coding upstream 83772 10997649 ~ 10999389 (+)
G154583 NA non-coding upstream 414900 10667998 ~ 10668261 (+)
G154574 NA non-coding upstream 506724 10575979 ~ 10576437 (+)
G154505 NA non-coding upstream 557109 10523967 ~ 10526052 (+)
G154473 NA non-coding upstream 593307 10419906 ~ 10489854 (+)
G154775 NA non-coding downstream 88384 11174395 ~ 11180237 (+)
G154815 dot1l non-coding downstream 275994 11362005 ~ 11362233 (+)
G154816 NA non-coding downstream 284413 11370424 ~ 11370912 (+)
G154831 NA non-coding downstream 292769 11378780 ~ 11379289 (+)
G154847 NA non-coding downstream 330054 11416065 ~ 11416329 (+)
AMCG00005840 LOC100304646,LOC107384145 other upstream 72807 11006798 ~ 11010354 (+)
G154636 LOC108435919,LOC108271001 other upstream 167432 10913397 ~ 10915729 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other upstream 346535 10721752 ~ 10736626 (+)
AMCG00005835 LOC107586405 other upstream 368454 10679937 ~ 10714707 (+)
G154499 NA other upstream 566771 10512504 ~ 10516390 (+)
G154798 NA other downstream 233953 11319964 ~ 11361770 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other downstream 320295 11406306 ~ 11409672 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other downstream 515891 11601902 ~ 11610151 (+)
AMCG00005895 NA other downstream 817341 11903352 ~ 11906087 (+)
AMCG00005987 NA other downstream 1605805 12691816 ~ 12709543 (+)

Expression


Co-expression Network