AMCG00006369


Basic Information

Item Value
gene id AMCG00006369
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3352205 ~ 3354806 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006369
aTGGCGAGCCAGTCTCAGGGTAtccagcagctgctgcaggcGGAGAAACGCGCCGCCGAGAAGGTGGCTGAGGCGAGGAAGAGTAAGAGACGGCGGCCGGGAGgaAAGACTCGCAGACTGAAGCAGGCAAAGGAGGAGGCCCAGGGAGAGATTGAACAGTacagggcagagagagagagggagttcaCACAGAAACAGCACACGGTGCTGGGCTCTCAGGGAAACCTGTCCACTGAGGTGGAGCAGCAGACCAGGCAGAAGATCCAGAGCATGCAGAGCAGCTACCAGCGCAACCGTGAGAAGGTGCTGAGACAGCTGCTGTCCATCACCTGCCACCTCAACCCCCAGATACACTGCAACTACCAGATCACAGCGTAGGAACAGCCCCCCAACACAGACTCTGAAAACCACACAACACGGCACAGACACAAAAGGCACACCCTGCAGACACTCACTACACTGCATGTGTTTTAAAACGTACATCATTGCATAACAAGACAAATCACTACATAGATACGTACACACTAAAAACACAACCTCAGCCCGATACACTAGTTATCAGTTCAGAGATGGAGagcacatttaatttcacacacaGCTACCAGATCTCTGCAAAGATGGACACACTGCAAATATTTGCTGCACACTCACCAAAAGTACACCCCCCAGCCAGACTAATTACATCACTGCATAGACTTACTGTAACTGTACCTTATATTACACCCCTCCCAGCACCAGATCTCTGCGTAGACCCAATGCAGGCACTTGCCCTCACTCCTGAACCCAGTCATTAACTCTGTCCAGCTTTGCAACATCGGCCTTGTGCGTTTGGCTCATTGTGGAGACAGTGTGCACGTGTGATCAGTGATAGTCATGTGCTTTTGATCTCAGTTATGCCATTAGCATGTCACTGCTTATTTAATGTACAGTGCAAAAATCAGGCGGATAGTCTTTCGGTAATGGGGCAATTTCTATGCCAGTGTAGTGGTGTCAGTAGTAGTTAGCAGCGGCAACAAAACAGTCCTAAAACCGATAATTAACCCTGGTGTGACCGCAGACATCTACACTAAATGTTGCAAATACATGCAGAGTCAGTCCTTTGAGGGTTTGTCATAGGTTGCAAAGCtaaaggatatttttttttccaccccccAAATAGTGCACATACACCAATCGCTGAATCTTGATTTAGCGTCAAAGTGGTTATAAATAAATTCTAAAGCCCAGATTGACTCCTAATAAGAGACAGACACTTCACACCATTGACAAATTCAGATTAACATCCTTTCCTTGCAGCTACTTACTCTCACCAAATTCTACACTGAACACTACTGCTGCCGCCCTTGAAAGTCCCATCTTCTACCCTCCACTGCAATTAATCACAGCTACATTTTCCCCTTTGCATGGCAGGGATTGCTAATCTATCCCTCAATTATCTGCCTGTCTGTATGGTAACCAGTTCAATAAAGTGGTGTACAGCA

Function

GO:      GO:0044765

KEGG:

id description
K02152 ATPeV1G, ATP6G; V-type H+-transporting ATPase subunit G

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006369 True 1481 mRNA 0.48 3 3352205 3354806

Neighbor

gene id symbol gene type direction distance location
AMCG00006373 NA coding upstream 2984 3342539 ~ 3349221 (+)
AMCG00006370 NA coding upstream 50846 3292743 ~ 3301359 (+)
AMCG00006367 NA coding upstream 119228 3220219 ~ 3232977 (+)
AMCG00006364 NA coding upstream 174666 3151072 ~ 3177539 (+)
AMCG00006360 NA coding upstream 240630 3094082 ~ 3111575 (+)
AMCG00006375 NA coding downstream 64509 3419315 ~ 3421518 (+)
AMCG00006374 NA coding downstream 71619 3426425 ~ 3428561 (+)
AMCG00006378 NA coding downstream 186912 3541718 ~ 3552354 (+)
AMCG00006383 NA coding downstream 230649 3585455 ~ 3596853 (+)
AMCG00006384 NA coding downstream 269141 3623947 ~ 3632121 (+)
G109260 NA non-coding upstream 115804 3234905 ~ 3236401 (+)
G109218 NA non-coding upstream 282977 3016779 ~ 3069228 (+)
G109217 NA non-coding upstream 323559 3004856 ~ 3028646 (+)
G109011 LOC100846954 non-coding upstream 833671 2436058 ~ 2518534 (+)
G109010 NA non-coding upstream 949054 2402903 ~ 2403151 (+)
G109389 NA non-coding downstream 193808 3548614 ~ 3548988 (+)
G109405 NA non-coding downstream 344302 3699108 ~ 3714779 (+)
G109392 NA non-coding downstream 367713 3722519 ~ 3755041 (+)
G109412 NA non-coding downstream 375081 3729887 ~ 3730840 (+)
G109396 NA non-coding downstream 417743 3772549 ~ 3774544 (+)
AMCG00006368 NA other upstream 66026 3274782 ~ 3286179 (+)
AMCG00006366 NA other upstream 100125 3242937 ~ 3252080 (+)
G108626 rps5,LOC107086176 other upstream 1537595 1637397 ~ 1814610 (+)
AMCG00006294 NA other upstream 1610869 1735932 ~ 1741336 (+)
G108585 NA other upstream 1922218 1350383 ~ 1429987 (+)
G109309 NA other downstream 6548 3361354 ~ 3365565 (+)
G109362 NA other downstream 148375 3503181 ~ 3506679 (+)
AMCG00006379 NA other downstream 215233 3570039 ~ 3621796 (+)
AMCG00006385 NA other downstream 244435 3599241 ~ 3612758 (+)
AMCG00006387 NA other downstream 282937 3637743 ~ 3648911 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G42725 NA non-coding NC_053115.1 CM020912.1 30144457 ~ 30145125 (+)
tiger barb (Puntius tetrazona) G38802 NA non-coding NC_056703.1 CM032072.1 23635195 ~ 23636185 (+)
mexican tetra (Astyanax mexicanus) G329805 atp6v1g1,LOC108259956,LOC107709788,LOC107566902 non-coding NW_019172913.1 APWO02000139.1 701398 ~ 704709 (-)