Gene
RNA
| Item | Value |
|---|---|
| gene id | G113631 |
| gene name | LOC100846954 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 27270459 ~ 27363030 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| transposase-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142308 | True | 438 | lncRNA | 0.51 | 2 | 27270459 | 27363030 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006929 | mtpn,LOC106576424 | coding | downstream | 630511 | 26608543 ~ 26639948 (-) |
| AMCG00006926 | NA | coding | downstream | 909008 | 26192389 ~ 26361451 (-) |
| AMCG00006924 | NA | coding | downstream | 1084697 | 26184251 ~ 26185762 (-) |
| AMCG00006925 | NA | coding | downstream | 1129640 | 26134171 ~ 26140819 (-) |
| AMCG00006923 | NA | coding | downstream | 1165073 | 26092897 ~ 26105386 (-) |
| AMCG00006935 | NA | coding | upstream | 274190 | 27637220 ~ 27649919 (-) |
| AMCG00006934 | NA | coding | upstream | 305756 | 27668786 ~ 27677200 (-) |
| AMCG00006938 | NA | coding | upstream | 442453 | 27805483 ~ 27824074 (-) |
| AMCG00006939 | itfg2 | coding | upstream | 601937 | 27964967 ~ 27970379 (-) |
| AMCG00006941 | NA | coding | upstream | 639472 | 28002502 ~ 28015328 (-) |
| G113587 | NA | non-coding | downstream | 105061 | 27165179 ~ 27165398 (-) |
| G113586 | NA | non-coding | downstream | 114602 | 27155535 ~ 27155857 (-) |
| G113573 | NA | non-coding | downstream | 210865 | 27059369 ~ 27059594 (-) |
| G113479 | NA | non-coding | downstream | 1232136 | 26001446 ~ 26038323 (-) |
| G113468 | NA | non-coding | downstream | 1274530 | 25995641 ~ 25995929 (-) |
| G113667 | NA | non-coding | upstream | 436908 | 27799938 ~ 27800294 (-) |
| G113673 | NA | non-coding | upstream | 439460 | 27802490 ~ 27805153 (-) |
| G113681 | NA | non-coding | upstream | 493081 | 27856111 ~ 27856461 (-) |
| G113722 | NA | non-coding | upstream | 695331 | 28058361 ~ 28058567 (-) |
| G113723 | NA | non-coding | upstream | 695689 | 28058719 ~ 28058931 (-) |
| G113530 | NA | other | downstream | 769778 | 26500015 ~ 26500681 (-) |
| AMCG00006866 | NA | other | downstream | 3699326 | 23568155 ~ 23571133 (-) |
| G113050 | NA | other | downstream | 3863252 | 23404175 ~ 23407207 (-) |
| AMCG00006854 | NA | other | downstream | 4312153 | 22953176 ~ 22958306 (-) |
| AMCG00006841 | NA | other | downstream | 5072795 | 22130495 ~ 22197664 (-) |
| G113645 | ptn,LOC106609498 | other | upstream | 39570 | 27402600 ~ 27527348 (-) |
| G113775 | LOC100846954 | other | upstream | 904232 | 28267262 ~ 28292598 (-) |
| G113833 | NA | other | upstream | 1348189 | 28711219 ~ 28812548 (-) |
