AMCG00007375


Basic Information

Item Value
gene id AMCG00007375
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 16469467 ~ 16621905 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007375
ATGAGGAAATTTCTTAGCCAAAAGCAGACCAAGTTGCCGTGGAAACCTGAGACCAGGACCACGGTGAAGAAGCTTGCTGTAGCCCCGAAATGGAAAAACTATGGTCTCCGAATCTTCGGCTACCTTCACCCTTACAAAGACGGCGATTTCCAGTTTGCTGTCGCCTCCGATGACAACTCTGAGTTTTGGCTGAGCTCCGATGAGAGCCCTCTCAATGCCAGGCTGCTGGTGTACGTTGGAAAGtaCCTCAGGAGCTCAGttgaaaccaatttgaaatggcCCTCATTCGTGTGCAGGAGCCCCACAttgGGTACCGAGTGGACTGCTCCAGGGGAATTCAGCAAGTTCAGATCCCAGTCCTCCAAGCCTGTCCACCTAATTTCTTCCAGACGGTACTATTTTGAAGTTCTGCACAAACAAGATGACAAGGGTTCAGACCACATTGAAGTTGGGtggCGTCCTTTCCTACCAGGCCTGAAGTTTGAAGTCATTGACACTACATACATCTCCTTATACACAGaagcTGGAACACTGAGCAACCTCAGCAGCTCAGAGTGCGAGGGGAAACAAAACACCCTGGGCAATCCTGAAGAGCTCGGGTGCACTATGACTAATCCGCCCTTGTCTGAGAATCAGGCATCATTGCCTGTGCTGGAGTCGGTGGTTCCTGCTGTTCAGCTGTAG
>TU29265
GCGGCTGGGTGGGTGATGGTCGAGCTAAGATGCTGCGCTTCCCGGTGAAGAAAATTCGGAAGCAGTTCAAACTCCTTCTCTTGCTGGTCCTGCTGACCTTCGCCGTCTGGTTCACCTACCTGCACATCAACCTGGTCCGCCAAGGCAAGGCCCTCAAACTGCACTTCAACTATGGCAAAGATGGTGAGAAGTTGAACGAGGGCACAGACACCAGTCGCAGGAGGGACTCCCATGCTGCATCCAGCCGCAGGAAACCCGAAGATGTGAGTGACAGCCGAGAGGATGAGCTGGCGGAAGAAggccaaaacacattttgggaGGAGAACAGGGACCCGACTGAAATGAGGAAATTTCTTAGCCAAAAGCAGACCAAGTTGCCGTGGAAACCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007375 True 684 mRNA 0.51 9 16469467 16530224
TU29265 False 392 TUCP 0.55 3 16530174 16621905

Neighbor

gene id symbol gene type direction distance location
AMCG00007373 b4galnt4 coding downstream 1780 16455533 ~ 16467687 (-)
AMCG00007374 abtb2b,abtb2,LOC107558307,LOC107675288 coding downstream 25354 16385385 ~ 16444113 (-)
AMCG00007364 phlda2,LOC100705395 coding downstream 199090 16269967 ~ 16270377 (-)
AMCG00007362 ptpn5 coding downstream 480844 15979313 ~ 15988623 (-)
AMCG00007363 LOC108428835 coding downstream 530937 15934147 ~ 15938530 (-)
AMCG00007376 tmem86a,LOC107707555,LOC107675270,LOC107709947,LOC107688565 coding upstream 43646 16665551 ~ 16670635 (-)
AMCG00007380 LOC103466153,LOC107104254,LOC106927356,LOC106962050,LOC101067251,LOC102221597,LOC107389017 coding upstream 90187 16712092 ~ 16732845 (-)
AMCG00007384 NA coding upstream 349397 16971302 ~ 16978773 (-)
AMCG00007387 tspan18 coding upstream 427811 17049716 ~ 17058918 (-)
AMCG00007386 NA coding upstream 528267 17150172 ~ 17168177 (-)
G23344 NA non-coding downstream 89176 16378518 ~ 16380291 (-)
G23250 NA non-coding downstream 400003 16068083 ~ 16069464 (-)
G23225 LOC103376870 non-coding downstream 668515 15734625 ~ 15800952 (-)
G23105 NA non-coding downstream 1337869 15131388 ~ 15131598 (-)
G23101 LOC101154678 non-coding downstream 1444722 15024241 ~ 15024745 (-)
G23379 NA non-coding upstream 38976 16660881 ~ 16662665 (-)
G23397 NA non-coding upstream 84384 16706289 ~ 16709180 (-)
G23429 NA non-coding upstream 326547 16948452 ~ 16948745 (-)
G23431 NA non-coding upstream 342062 16963967 ~ 16964267 (-)
G23439 LOC106560706,LOC103380370,LOC107104255,LOC105904524 non-coding upstream 371010 16992915 ~ 16993435 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 123887 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 155435 16237461 ~ 16314032 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 2436255 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 2523402 13945643 ~ 13946065 (-)
G22838 NA other downstream 3117394 13351517 ~ 13352073 (-)
G23661 NA other upstream 1433565 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 1580554 18202459 ~ 18208020 (-)
G23838 NA other upstream 2154455 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 3169796 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 3293241 19915146 ~ 19923153 (-)

Expression


Co-expression Network