AMCG00008605


Basic Information

Item Value
gene id AMCG00008605
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 5766764 ~ 5776682 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008605
GACAAGAAGCCTTCCGAAAGGTTTTGTAAAACCTGCAAGCTCAATTTCTGCAAGAATTGTCTGAGGAAACTTCACAGCAACTCTGCTTTTCAGTCTCACACCTTGATCAAACCTGTTAAAAACCCGGGTGAATTAGCATGCTTCTGCCACCCTGGAAAGATCTTGACGCACTACAGCTTTACTGATGGAAGAACCATTTGTGAAGAGTGCATGAATGTCACCTCTGACACTCCAGTGATTTCCGAGGCTTATGTCAACAAATCAAGAGGCTTACATGCAGCTCTAGATCAAGCAATGAAAGCAAAAGAACTGTGTCAATCTGACATCAGAGATATTGGATTTTTAAAATCCAGACTTAAGCCACAAGTGAAGGAGCTGAACAGAAGGGTGACTGAAGGATTCAAGGACTTGCACAAGAAGCTCaaagaaaaagaggaggagATAAAAGGAGCTATTGAGAAGTTGTACAAGGAAACTGAAGAAGATGCTGAGCAGTTCATCAGCGATTCCTCTAAATATGTTTCTATCCTGGAGGGTCTGGTTCAGTTCTCTGAAGAGTCCCTGAAGGAGAAGAACGAAACAGTGTTCCTGCAGGGCGTTGATAATACCATCTTCCAGATCGGCAAGGTTTTAGAGAGGAATTACCAGTCCTGTGAGACTTTAAAACAAGaaccacttaaaaaaataacggTAGACTTTAAAAGTATCAAGGATGGTTTGAGCAATCTAGTCTGTGAAATCAAGGATGACATACAGCTGCCCAAACAACCATTCATCTACCGGCACACTGTGAATGGAGTCTCAGTCCAGATCAATTGGATGTTTCCCCTTGGAGAGGGTGTTAATTCTTTTGATGTTCATTTCCAAGAAGTAGTTTCTCTCAATTCCACCATGGATATACCACAGGATCAAGGCAAGCTGGTCTCTGGTATAGAGAAATGCTTCTACAAAGCAGAGTGTCTGAATCCCAATGCCCAGTACATCTTTACAGTTCGGTCACAGAACATGCTTGGAAAGGGGTCATGGAGTCATGCTTACAGGCCATCAACACGCTGTCATGCAGAGATTGGGGGAGGTGGGATACCTGGGAACAATGCCACCACCCAGGGTCCATCGAGCAGACTGCCCTCATGGTGCTGCAGTACCTGGCGGAGGATATGGGGTGGGTGCCGTCCCGAGAGCCAGAGGGGGAGGAGCTGGCCCGGGGAGGACGCGCCCGCAACGCCCGGGGTCgtcaggctgctgctgctgctgccgcccgGAGATGACGTGTGCGCACCGCCTGGGGCCGCCAGTCTGCTGCTGCAGCCCAGGGATGACGTGCCCTCACCGCCCGGGTCCGACAGCCTGCTGCCGCTGCCCAGGGATGTAGTACTGGTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008605 True 1383 mRNA 0.49 4 5766764 5776682

Neighbor

gene id symbol gene type direction distance location
AMCG00008606 NA coding upstream 9129 5744804 ~ 5757635 (+)
AMCG00008601 NA coding upstream 131016 5614919 ~ 5635748 (+)
AMCG00008594 NA coding upstream 657960 5094364 ~ 5108804 (+)
AMCG00008593 LOC107093428 coding upstream 711008 5042754 ~ 5055756 (+)
AMCG00008590 NA coding upstream 862691 4899445 ~ 4904073 (+)
AMCG00008607 NA coding downstream 67663 5844345 ~ 5847681 (+)
AMCG00008604 NA coding downstream 105311 5881993 ~ 5883048 (+)
AMCG00008616 NA coding downstream 254165 6030847 ~ 6045870 (+)
AMCG00008617 NA coding downstream 332281 6108963 ~ 6119352 (+)
AMCG00008618 NA coding downstream 411812 6188494 ~ 6207751 (+)
G50214 NA non-coding upstream 171712 5594712 ~ 5595052 (+)
G50213 NA non-coding upstream 173833 5592436 ~ 5592931 (+)
G50212 NA non-coding upstream 175563 5586800 ~ 5591201 (+)
G50206 NA non-coding upstream 186742 5579222 ~ 5580022 (+)
G50196 NA non-coding upstream 206155 5560021 ~ 5560609 (+)
G50255 NA non-coding downstream 164525 5941207 ~ 5941527 (+)
G50336 LOC104962440 non-coding downstream 566012 6342694 ~ 6342978 (+)
G50340 NA non-coding downstream 595750 6372432 ~ 6372911 (+)
G50342 NA non-coding downstream 597983 6374665 ~ 6375034 (+)
G50346 NA non-coding downstream 713975 6490657 ~ 6518591 (+)
G50243 NA other upstream 24014 5738541 ~ 5742750 (+)
G50215 NA other upstream 169965 5596023 ~ 5596799 (+)
AMCG00008580 pnpla6,LOC106564686 other upstream 1193890 4561991 ~ 4572874 (+)
G49982 NA other upstream 1601281 4162058 ~ 4165483 (+)
G49980 NA other upstream 1606702 4156088 ~ 4160062 (+)
G50448 NA other downstream 1180929 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 1520204 7296886 ~ 7315850 (+)
G50583 NA other downstream 2157147 7933829 ~ 7939771 (+)
AMCG00008664 Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 other downstream 2502171 8278853 ~ 8324778 (+)
G50747 NA other downstream 2673484 8450166 ~ 8666548 (+)

Expression


Co-expression Network