AMCG00008833


Basic Information

Item Value
gene id AMCG00008833
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12926593 ~ 12942236 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008833
ATGATACCCGGACACTTCCTGGAGGAAATCCTTGTCTGTTGCAGACGTCTATGGTCCAGCCTGGCTCCAGCAGTCTACAGCCCAACCACTCTACCTAGCTCTGCAGAGGCCTACAGCCCGACCGCTCTAACCCTGTGCTCTGGTCTGGCCACCCTACCCCAGCGGCAGACGTCTATGGTGTGTCCCCTGAATCTGGAGCCCATGAGTCGAGCCGCCACACTGCAGCGCCGCACCACCTACCTCATCTCCCTCACCCTGGTGAAGGTCGAGGCTGTGCCCGACGATGGAACCAGGACCTCCCAACTTGGCAGCCCCGGGCCGGGGACAGAGGGGCTGGAGGGCAGGCCCCCCCATGCCCagcctgaggaggaagaggaagaggaggacacAGAGATAGAGGATAAGGACTGGGGTGGTGCAGCACAACAGGGGCGCCCCAAGCCCAGGGAAGGAGGGGGGAAAGACCAGACGGCCATCTGGGACAGACCCCCGGACAAGCAGCTAGAGGAGGAGGACTGGGGGCTGGATGTTGGCAGGGGGTGTGTTGGTGGGCTGGCGGAAGGGGACAGCACTGCATCTGGGGAAGACACATCCTGGGAGTCAGAGCCGTCccggggaggaggaggaggaagagaaggggTGGGAGTGAGGGAGGTGGCATCAGAGCCTCCAAGGACGCCTTCCCGCTGCCAGATCCCAGTGCGGGTCGGGGGGGCGCGTCCAGGAGCGCTGCTGCGGGGGCAGGGAGTGGGAGTGGGTCGCAGGGAAGGGAAGGATCCCACAGCTACCACCACGAGAACACTGGAACGCAAGGACAAGGGGCTAAAGGGAGCCCCTCCcccagcagcagtagcagcagcagccgccacTGCCCCCTCTCGCCTGTCCTGGCCAGAAAATGAGTGGAAGCCAAAGCCAAGGGGTGTGGTGACCAGCTCGGCCTCTCTGCCCGCCCCCGGCAGCCTACAGCCCAAGCCCCCTCGCACGGGCAAGAGCCGCACCCTGGACAACAGCGAtctgcactctctctcccaggaCCTACGCCGGGGGGGCCCTGACGCACCCCTCCCCCCCGGCTCCCTGCTGCCTCCAGCCAGCTCTGCCACCCTCCACCACCCTCAGCGCCCTGCCTCCGCCACCCGCGACCGTAAAATGCTCAAGTTCATCAGTGGGATTTTCACCAAGAGCACACCGGCCCCTACCACCCCCCCAGGGCCCCCCCTCCATGGCTACGTGCAGAGGGAGTCCAGCGAAGAGGAAGcCGCTTGTGCGAACAGTCAAGAATGGACCCTGAATCGCTCCATACCAGAGCTCAGACTGGGAGTGCTGGGCAGTCTGCGCAGTGGGAAGTCAGCACTGGTGCACAGATACATCACTGGGAGCTACCTGTCAACGGAGTCCGCTGAGGggggcAGGTATAAGAAGGAGGTATTAGTGGAGGGACAGAGTCACTTGTTGCTGATTAGGGAGGAGCCCGGCCTTCCCGATGCCCAGTTCTGCAGCTGGGTGGACGCGGTGCTGCTGGTGTACAGCCTGGAGAACGAGAGCAGCTTCCAGGAGGTGTACAAGAACTACAGTCAGCTGGTCACCTTCCGCAACTCCACTGACCTCCCTGTCATAGTGGTGGGCACACAGGaCAAGATCAGCGCCTCGAACCCGCGTGTGATTGATGACGCCCGCGCAAGGCAGCTGTGTACCGATGTGCGGCGCTGTGCGTACTATGAGACCTGCTCCACTTACGGGCTGAATGTAGACAGGGTCTTCTCAGAGGccgCTCAGAAGATGTTCATGGTGAAGAAGCAGAATGCCCTTCTGGCCTGTAAGTCTCTGCCCAACTCACCCAGCCACTCTGGTGGCTCCACGCCCGTGTCCGGGCCCTTCCCTGGACAGgcCAGTAATGGAGGTCAAAGCAGTGACTACTCCTCCTCCCTGCCGTCCACCCCAGTGGTCAGTCACCGTGAGCTGAGGGCAGGCGAGGGAGGGCCGGGGTCCTCCACCCCAGGGTCCCTGCACCGCCCCCCCCGCCGACGCACATCCCTCTTCAcgTCTCAGAACCGGCGAGGCAGCGACTCAGAGAAGAGGAGTTCAGACAGCAAGGGTGATATCGGCAGTGGCCGCGCCATCCCCATCAAGCAGGACTACATGCAGAACGCCCATGGGAAGGAGATTGACCTGCTGCGCACGACGGTCAAAGTACCCGGGAAACGCCCCCCTCGCGCCATCACCCCCTGCGGCCCCTCCCCCGGCCTCAATGGGCTGGTCCGGGACATGGGGGGAACGGGGGGGGATGGGGCCAGCTCAGCTGGCCTGTTCCCCAGCTCCCTGCTCCCTGTGGAGGAGCAGTCTGGACGCGTGTCCCCGCGGTCAGAGCGGAGTGTCCAGCGCTGCCCGTCCTCCCTGTCCAGCAAAGCGCAGAGCGTGGACTCAGCCTCCGAGGGCGTGGCCAGCCCCACCTCGGTGAAGGACCACGCCCCGCCCTCCCCGATGATTGACAGGAAGAAGCACCGCAGGAAGAAGAGCATGAATGTGAAGGGCGACACGATACAGGGGCAGGCCGAGGAGGAGGAGAACTTTGACTTCATGATAGTGTCCAGCTCGGGGCAGACCTGGCACTTCGAGGCACCCAGCCTAGAGGAACGCGACTCCTGGGTCCAGGCCATCGAGAGCCAGATCCTGGCCAGCCTGCAGTCCTGCGAGAGCAGCAAGAACAAGGCGACTGTGGCCCTGAAGGCCATTCGCAACGCCAAGGGCAACGGCTTCTGTGTGGACTGTGGGGCGCCCAACCCGACCTGGGCCAGCCTGAACCTGGGGGCTCTGATCTGCATCGAGTGCTCGGGAATCCACCGCAACCTGGGCACCCACCTGTCCCGTGTGCGCTCGCTGGACCTGGACGACTGGCCCCGTGAGCTCACCCTGGTGTTGACGGCCATCGGCAACAGCCTGGCCAACAGCATCTGGGAGAGCAGCACTCAGGGCCGCACCAAGCCCACGCCTGACGCCTCGCGggaggagagggaggcctgGATCCGGGCAAAGTACGAGCAGCGTCTGTTTGTAGCTCCACTACCTACCACCGACGGAGGGGTGGGGCCTGGGCTGGGGGCCCGGCTGGTCACTGCAGTGACAGAGAGGGACCTCCcagggctgctgctgctcttggCTCACGGCACCAAGGAGGAGATCAATGCCCCCCTGCCACCCCCAGCGCCCGggcagcccccacccccccgctcCGCGTTGCACGTCTCCTGCCAGCTGCCCGACGTGGTCATGACGCAGCTGCTTGTCTGGTATGGCAGTGACGTGAGGGTGCGGGATGCCCAGGGTCAGACAGCGCTGACGCTGGCGCGTCGGGCGGGCAGCCAGGAGTGCGCCGACATCTTGCTCCAGCACGGCTGCCCCAACGAGGCCCCCCCCGGCGCGTCCACACCTGGGCTCTCCCGCAAGTCCAGCACAGCCAGCCTGAGCCGCGCCAACTCCCGCAGGGGGGTGTCCTAA

Function

GO: NA

KEGG:

id description
K12491 AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008833 True 3498 mRNA 0.65 20 12926593 12942236

Neighbor

gene id symbol gene type direction distance location
AMCG00008832 zbtb39,LOC102796472,LOC106567078 coding downstream 8797 12913536 ~ 12917796 (-)
AMCG00008826 spryd3 coding downstream 41925 12863623 ~ 12884668 (-)
AMCG00008827 NA coding downstream 70368 12847007 ~ 12856225 (-)
AMCG00008821 NA coding downstream 180631 12739173 ~ 12745962 (-)
AMCG00008823 NA coding downstream 191114 12725524 ~ 12735479 (-)
AMCG00008834 cdk4,LOC107747701,LOC107567936,LOC106565448,LOC107701179 coding upstream 24112 12966348 ~ 12969537 (-)
AMCG00008839 NA coding upstream 88334 13030570 ~ 13046587 (-)
AMCG00008846 NA coding upstream 213261 13155497 ~ 13158303 (-)
AMCG00008843 NA coding upstream 231957 13174193 ~ 13180841 (-)
AMCG00008850 NA coding upstream 243203 13185439 ~ 13203264 (-)
G51851 NA non-coding downstream 1937 12923204 ~ 12924656 (-)
G51811 NA non-coding downstream 5802 12920545 ~ 12920791 (-)
G51809 NA non-coding downstream 18260 12907321 ~ 12908333 (-)
G51724 NA non-coding downstream 266476 12657226 ~ 12660117 (-)
G51707 NA non-coding downstream 376976 12547400 ~ 12549617 (-)
G51875 NA non-coding upstream 79788 13022024 ~ 13023104 (-)
G51946 NA non-coding upstream 227194 13169430 ~ 13213278 (-)
G51950 NA non-coding upstream 267315 13209551 ~ 13211199 (-)
G51947 NA non-coding upstream 272036 13214272 ~ 13215995 (-)
G51948 NA non-coding upstream 311617 13253853 ~ 13257619 (-)
G51799 NA other downstream 29459 12895335 ~ 12897134 (-)
G51797 NA other downstream 34996 12890811 ~ 12891597 (-)
AMCG00008815 NA other downstream 321333 12601291 ~ 12605260 (-)
AMCG00008777 dctn2,LOC102785932 other downstream 1600234 11235642 ~ 11326359 (-)
G51250 NA other downstream 2127439 10797632 ~ 10799154 (-)
G51867 NA other upstream 58590 13000826 ~ 13001888 (-)
AMCG00008845 NA other upstream 148301 13090537 ~ 13097934 (-)
AMCG00008844 NA other upstream 193496 13135732 ~ 13184356 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 315462 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 365186 13307422 ~ 13309425 (-)

Expression


Co-expression Network