G51947


Basic Information

Item Value
gene id G51947
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13214272 ~ 13215995 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU64999
GAAGATTTTCCGCATTGCCGCGTCACAGCTCAGCGCTATAAATACCCGCCCCGACCTTCGTCACGTCCTCTTGGAGTTGTTGCCGTCTTCGGAAGGTACGCATCGGCTGTCTTCAGCGCAGTGGCTTGGCTTGAAATTTGATCGAATAATCCAACTCAATCCATCGCCATCCGTGGGTTTtactaattgttttatttctctctctcgttcaCAGACACATCTCCACAAGATGAGAGCAAAGTGGAGAAAGAAGCGAATGCGCAGGTAAGCACTTTCCACCAGGGGTttaactgggggggggggggatgtgtgAATCTTGTATCCAGAATTTTGTTAGTGTAAGTTTtgattaatttcttggcagatgcccttatccagggtgatttagTGCATATTCTGCAGTCCTGTCGCAGGATTTCTGCCTGAGCTATTTTCCTAGTAAATTTAAATGCTCCTTATTCATACTCTCATGTACTTCTATTTCACCATGTAATCTACCTATG

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64999 True 503 lncRNA 0.45 2 13214272 13215995

Neighbor

gene id symbol gene type direction distance location
AMCG00008848 zc3h10,LOC108412311 coding downstream 5725 13206889 ~ 13208547 (-)
AMCG00008850 NA coding downstream 11008 13185439 ~ 13203264 (-)
AMCG00008843 NA coding downstream 33431 13174193 ~ 13180841 (-)
AMCG00008846 NA coding downstream 55969 13155497 ~ 13158303 (-)
AMCG00008839 NA coding downstream 167685 13030570 ~ 13046587 (-)
AMCG00008852 LOC107737517,LOC107593906,LOC107716155,LOC107668344,LOC107581315,LOC108425565 coding upstream 3929 13219924 ~ 13224794 (-)
AMCG00008851 NA coding upstream 11626 13227621 ~ 13246570 (-)
AMCG00008849 NA coding upstream 52539 13268534 ~ 13273981 (-)
AMCG00008861 NA coding upstream 86717 13302712 ~ 13305069 (-)
AMCG00008859 NA coding upstream 112974 13328969 ~ 13331002 (-)
G51946 NA non-coding downstream 994 13169430 ~ 13213278 (-)
G51950 NA non-coding downstream 3073 13209551 ~ 13211199 (-)
G51875 NA non-coding downstream 191168 13022024 ~ 13023104 (-)
G51851 NA non-coding downstream 289616 12923204 ~ 12924656 (-)
G51811 NA non-coding downstream 293481 12920545 ~ 12920791 (-)
G51948 NA non-coding upstream 37858 13253853 ~ 13257619 (-)
G51965 NA non-coding upstream 83343 13299338 ~ 13300283 (-)
G52019 NA non-coding upstream 157388 13373383 ~ 13455852 (-)
G52041 NA non-coding upstream 222093 13438088 ~ 13439626 (-)
G52131 NA non-coding upstream 555565 13771560 ~ 13776929 (-)
AMCG00008844 NA other downstream 29916 13135732 ~ 13184356 (-)
AMCG00008845 NA other downstream 116338 13090537 ~ 13097934 (-)
G51867 NA other downstream 212384 13000826 ~ 13001888 (-)
G51799 NA other downstream 317138 12895335 ~ 12897134 (-)
G51797 NA other downstream 322675 12890811 ~ 12891597 (-)
AMCG00008853 ARF3,arf3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 other upstream 41703 13257698 ~ 13261822 (-)
G51974 rps26 other upstream 91427 13307422 ~ 13309425 (-)
AMCG00008860 NA other upstream 100872 13316867 ~ 13325227 (-)
G52099 NA other upstream 469340 13685335 ~ 13686737 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other upstream 722456 13938451 ~ 13983893 (-)

Expression


Co-expression Network