AMCG00009551


Basic Information

Item Value
gene id AMCG00009551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41405896 ~ 41414075 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009551
ATGGCCACCACCATATGCCAGACGGCCGGGTTCCTCCTCGCCGTTCTGGGAGTAGGAGCTATTATTGCAGCCACCGGCATGAACAACTGGAGCAGCCAGGACCGCCAGGGAGATGTGGTGACATCTATCTACACCTACAAAGGGCTGTGGAACAACTGCGAAGTGATGGGATTTCTGCTCGGGGTTTTGGGGGTCGCGGGGATCATCGCCGCCACTGGAATGGATCAGTGGAGCACCCAAGACCGCTTCGACGACCCAGTCACGGCGGTCTACAACTACAAGGGTCTCTGGCGGACTTGCGGCACACAGAGCTCTGGACTCACTGAATGCCGGCCTTACTTTACCATCCTTGGGCTGCCAGGACTTGTGGCGATATCGGCTACAACAGGCATGAACCAGTGGAGGATACAGGATCGGTACTACACCGTGGTGGCTAGTGTTTACACCTATTCTGGACTGTGGTACTCTTGTGTTGGCGAATCAATTGGCCAGTCAGAATGCCGACCCTTCTACACTGTTCTGGGACTACCAGGTAGCTTCCAGGCTGTCCGAGCCCTGATGATCGTGGGAATCGTCCTGGGAGCCATCGGGGTGCTGATCGCCATCTTTGCCCTGAAGTGCATCAAGATGGGGAGTATGGAGGACACAGCCAAGGCCAACATGACCTTGACAGCGGGGATCATGTTCATCCTGGGAGGCATCTGTGCGATTGCTGGGGTCTCTGTCTTTGCCAATCTGATCGTGACCAACTTCATGTTCCTCACCCCTCAAGTTGCGTATGGAGGATCCGTCCAGGTCAGGTACACATTCGGCAATGCCCTGTTCGTCGGATGGGTGGGTGGAGCGGTGCTGATGGTGGGGGGAATCATGATGTGCCTGGCCTGTAAAGGCATGGTGCCGGAGAAGTCGCGCTTCAACGCAGTGTCTTACAAAGCGCCATCCCATAACACCATCTACAAGTCCGGTCAGGGGTATGAGGACAAGTCTAGGCAAGGCTACGATGAGGGATACAGGGCCCGCAGCGAGGATGGGCAGCGATCCGCCAAATTTGACTATGTGTAA

Function

GO: NA

KEGG:

id description
K06087 CLDN; claudin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009551 True 1062 mRNA 0.56 7 41405896 41414075

Neighbor

gene id symbol gene type direction distance location
AMCG00009542 eif4e2,LOC107730458,LOC107692895 coding upstream 273782 41123722 ~ 41132114 (+)
AMCG00009544 NA coding upstream 288520 41116821 ~ 41117376 (+)
AMCG00009541 NA coding upstream 289151 41106713 ~ 41116745 (+)
AMCG00009543 NA coding upstream 313986 41091049 ~ 41091910 (+)
AMCG00009539 NA coding upstream 338267 41054578 ~ 41067629 (+)
AMCG00009550 NA coding downstream 19188 41433263 ~ 41435199 (+)
AMCG00009552 NA coding downstream 62462 41476537 ~ 41479996 (+)
AMCG00009555 NA coding downstream 71155 41485230 ~ 41498805 (+)
AMCG00009554 NA coding downstream 90919 41504994 ~ 41509847 (+)
AMCG00009562 NA coding downstream 146313 41560388 ~ 41568832 (+)
G57599 NA non-coding upstream 472686 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 576219 40829072 ~ 40829677 (+)
G57544 NA non-coding upstream 1062515 40339382 ~ 40343381 (+)
G57523 NA non-coding upstream 1246270 40159409 ~ 40159626 (+)
G57457 NA non-coding upstream 1372563 40030546 ~ 40033333 (+)
G57690 NA non-coding downstream 85889 41499964 ~ 41500218 (+)
G57770 NA non-coding downstream 335480 41749555 ~ 41750144 (+)
G57775 NA non-coding downstream 401846 41815921 ~ 41817795 (+)
G57792 NA non-coding downstream 425090 41839165 ~ 41839466 (+)
G57843 NA non-coding downstream 671204 42085279 ~ 42088145 (+)
G57604 NA other upstream 411237 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1300844 40086474 ~ 40105052 (+)
G57430 NA other upstream 1456696 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 1968879 39434900 ~ 39437017 (+)
G57105 NA other upstream 2948304 38442255 ~ 38457592 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 182154 41596229 ~ 41599124 (+)
G57830 NA other downstream 621943 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 2022915 43436990 ~ 43444420 (+)
G58324 NA other downstream 2518877 43932952 ~ 43935762 (+)
G58522 NA other downstream 2972422 44386497 ~ 44407568 (+)

Expression


Co-expression Network