G57523


Basic Information

Item Value
gene id G57523
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40159409 ~ 40159626 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71932
cgactctctgtgtgaagaagtgtctcccgttttccgttttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggttgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71932 True 218 lncRNA 0.49 1 40159409 40159626

Neighbor

gene id symbol gene type direction distance location
AMCG00009515 NA coding upstream 17129 40140469 ~ 40142280 (+)
AMCG00009509 NA coding upstream 87122 40071239 ~ 40072287 (+)
AMCG00009512 NA coding upstream 129949 40028792 ~ 40029460 (+)
AMCG00009510 polr2d,rpb4,LOC106612892,LOC107671669 coding upstream 133970 40022081 ~ 40025439 (+)
AMCG00009503 NA coding upstream 177362 39967297 ~ 39982047 (+)
AMCG00009514 rpp21,LOC107653575,LOC107588084 coding downstream 13340 40172966 ~ 40179050 (+)
AMCG00009525 LOC106584350,LOC105907042,LOC106599532 coding downstream 29515 40189141 ~ 40203113 (+)
AMCG00009524 NA coding downstream 53022 40212648 ~ 40220369 (+)
AMCG00009530 NA coding downstream 252587 40412213 ~ 40420872 (+)
AMCG00009529 NA coding downstream 276701 40436327 ~ 40441597 (+)
G57457 NA non-coding upstream 126076 40030546 ~ 40033333 (+)
G57428 NA non-coding upstream 216373 39941222 ~ 39943036 (+)
G57401 NA non-coding upstream 284239 39874881 ~ 39875170 (+)
G57378 NA non-coding upstream 352481 39806583 ~ 39806928 (+)
G57329 NA non-coding upstream 699733 39459398 ~ 39459676 (+)
G57544 NA non-coding downstream 179756 40339382 ~ 40343381 (+)
G57597 NA non-coding downstream 669446 40829072 ~ 40829677 (+)
G57599 NA non-coding downstream 773341 40932967 ~ 40933210 (+)
G57690 NA non-coding downstream 1340338 41499964 ~ 41500218 (+)
G57770 NA non-coding downstream 1589929 41749555 ~ 41750144 (+)
AMCG00009516 NA other upstream 54357 40086474 ~ 40105052 (+)
G57430 NA other upstream 210209 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 722392 39434900 ~ 39437017 (+)
G57105 NA other upstream 1701817 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2542713 37608305 ~ 37616696 (+)
G57604 NA other downstream 831176 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1436603 41596229 ~ 41599124 (+)
G57830 NA other downstream 1876392 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 3277364 43436990 ~ 43444420 (+)
G58324 NA other downstream 3773326 43932952 ~ 43935762 (+)

Expression


Co-expression Network