G57329


Basic Information

Item Value
gene id G57329
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39459398 ~ 39459676 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71673
cttcgctccccacgtgcatcaatgagccttggctgcccatgaccctgtcgccggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcataccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatcacaatttggtccttgtcaaagtcactcagatccttacgcttgcctatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgttgcctaatatatccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71673 True 279 lncRNA 0.49 1 39459398 39459676

Neighbor

gene id symbol gene type direction distance location
AMCG00009481 NA coding upstream 43802 39409492 ~ 39415596 (+)
AMCG00009482 NA coding upstream 54225 39404329 ~ 39405173 (+)
AMCG00009483 NA coding upstream 58210 39393569 ~ 39401188 (+)
AMCG00009484 NA coding upstream 65833 39378249 ~ 39393565 (+)
AMCG00009479 NA coding upstream 156613 39277091 ~ 39302785 (+)
AMCG00009489 NA coding downstream 23485 39483161 ~ 39503369 (+)
AMCG00009490 NA coding downstream 46258 39505934 ~ 39508504 (+)
AMCG00009488 NA coding downstream 101051 39560727 ~ 39566286 (+)
AMCG00009496 NA coding downstream 347748 39807424 ~ 39814778 (+)
AMCG00009499 NA coding downstream 367630 39827306 ~ 39837637 (+)
G57287 NA non-coding upstream 152624 39306488 ~ 39306774 (+)
G57286 NA non-coding upstream 153168 39303337 ~ 39306230 (+)
G57175 NA non-coding upstream 624453 38757380 ~ 38834945 (+)
G57164 NA non-coding upstream 826047 38633097 ~ 38633351 (+)
G57161 NA non-coding upstream 831263 38627919 ~ 38628135 (+)
G57378 NA non-coding downstream 346907 39806583 ~ 39806928 (+)
G57401 NA non-coding downstream 415205 39874881 ~ 39875170 (+)
G57428 NA non-coding downstream 481546 39941222 ~ 39943036 (+)
G57457 NA non-coding downstream 570870 40030546 ~ 40033333 (+)
G57523 NA non-coding downstream 699733 40159409 ~ 40159626 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 22381 39434900 ~ 39437017 (+)
G57105 NA other upstream 1001806 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 1842702 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 1854274 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 1995893 37422017 ~ 37463505 (+)
G57430 NA other downstream 488330 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 626798 40086474 ~ 40105052 (+)
G57604 NA other downstream 1531126 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 2136553 41596229 ~ 41599124 (+)
G57830 NA other downstream 2576342 42036018 ~ 42078241 (+)

Expression


Co-expression Network