G57161


Basic Information

Item Value
gene id G57161
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38627919 ~ 38628135 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71462
GACTCGAGAAGAGGAGTTTCCGGTTTGGCTGTACGCATCTTTAATCTGCCTCCACTGCTGCTCCAAACATGACCTTCTCTGACACAGGAAATTATCCATCAAAAGCACAGCTGTTGTTTCAGACCCAGAAaagtttcttctctctctttctctctctctctctctctccgccaaACCACATGAATACACACAAGCTTCAGACACAGACTCACGTTGG

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU71462 True 217 lncRNA 0.47 1 38627919 38628135

Neighbor

gene id symbol gene type direction distance location
AMCG00009464 pid1 coding upstream 12081 38614820 ~ 38615838 (+)
AMCG00009463 dner coding upstream 44488 38541989 ~ 38583431 (+)
AMCG00009462 trip12 coding upstream 116897 38481113 ~ 38511022 (+)
AMCG00009456 NA coding upstream 153880 38467267 ~ 38474039 (+)
AMCG00009457 NA coding upstream 272949 38334048 ~ 38354970 (+)
AMCG00009468 NA coding downstream 27650 38655785 ~ 38729386 (+)
AMCG00009465 NA coding downstream 112185 38740320 ~ 38751025 (+)
AMCG00009466 NA coding downstream 135636 38763771 ~ 38775610 (+)
AMCG00009469 NA coding downstream 185900 38814035 ~ 38817666 (+)
AMCG00009473 NA coding downstream 213821 38841956 ~ 38843311 (+)
G57036 NA non-coding upstream 347440 38202794 ~ 38280479 (+)
G56995 NA non-coding upstream 493953 38130082 ~ 38133966 (+)
G56982 NA non-coding upstream 559766 38063790 ~ 38068153 (+)
G56775 NA non-coding upstream 1336254 37285843 ~ 37291665 (+)
G56754 NA non-coding upstream 1432831 37193726 ~ 37195088 (+)
G57164 NA non-coding downstream 4962 38633097 ~ 38633351 (+)
G57175 NA non-coding downstream 129245 38757380 ~ 38834945 (+)
G57286 NA non-coding downstream 675202 39303337 ~ 39306230 (+)
G57287 NA non-coding downstream 678353 39306488 ~ 39306774 (+)
G57329 NA non-coding downstream 831263 39459398 ~ 39459676 (+)
G57105 NA other upstream 170327 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 1011223 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 1022795 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 1164414 37422017 ~ 37463505 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other upstream 1260248 37348108 ~ 37367671 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other downstream 806765 39434900 ~ 39437017 (+)
G57430 NA other downstream 1319871 39948006 ~ 39949200 (+)
AMCG00009516 NA other downstream 1458339 40086474 ~ 40105052 (+)
G57604 NA other downstream 2362667 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 2968094 41596229 ~ 41599124 (+)

Expression


Co-expression Network