AMCG00009568


Basic Information

Item Value
gene id AMCG00009568
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41775209 ~ 41784537 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009568
ATGGCTCTCACTGCCATTTTGGGTTTACCTGCCAACGTGATGGTCCTGCGGGTTTTGCTCAGAAGTACAGTGGAGTCCTCCACATCAGACATCTTCATCAGGAGCCTGGCAATCGCAGACACTTTGATTTGCCTGATAATTCCTGTTACCATTAGTAACATGTTCATTCTGCACAACAACTACATTTGGTCACTACATTATTTCTTTTACCTCAATGAGACCGGGGGTCCCTTGTTGCTCTGCTGTATCTGTGTTGACCGTTACATCGCGGTACTCTATCCCATCACCTTTGTGAGGTTCGaagatacaaaatacagaactgtTATTACCACTGTTATGTGGGCTTTTGCTACAGGAGTCTCCATCTTTCAGTATTTAAATGTCACTTTCTCAGTGATGGTGTCCTGTAACATCTCCATAATGTGGGCCCTGCGGCAGGCTGGCCCAGGCAGTGATACGATGCACCCTATGAAGAAAAAAGCATTCAACACGAtcctcattgttttatttattgtgatatttaattatactaTAGCAGTTGTACTCCCCACTTCCCACTTGATCAGGGTATGCCTTTGTGATTATGAGATCCTGCATGTAGCCCCTACTGTATCTGTACactttaattcaaaatacagAATGGATACTCTCTTATTCAACTCAACCACAACCTCCAACTTCAGCAAGTTCAGCAGCAAAGACATTATTAGTGAGTGCAGTGGTGTATTAGTTTACATAGTTGTAATGGCTCTCACTGCCATTTTGGGTTTACCTGCCAACATGATGGTCCTGCGGGTTTTGCTCAGAAGCACAGTGGAGTCCTCCACGTCGGACATCTTCATCAGGAGCCTGGCAGTCACAGACACTTTGTTTTGCCTCATCATTCCTGTCTCAATTAGTAACTTGTTCATTCAGCAAAACTACATTCGGTCggctgtatattttttcttttacctcAACAAGACCGGGGGTCCTTTGTTACTCTGCTGTATCTGTGTTGACCGTTACATCGCGGTACTCTATCCCATCACCTTCGTGAGGTTCAAAGATAGAAAATACAGAGCTGTTATTACCACTGTTATGTGGGCTTTTGCTACAGGAGTCTctgtctttatgtattttaatgtaatcgAGGGCAGTTATATTTCCTCAGGCATCTTCATCATCACTTTCTCAGTGATGGTGTTCTGTAACATCTCCATAATGCGGGCCCTGCGGCAGGCTGGCCCAGGCAGCGATACAATGCACCCAATGAAGAAAAAAGCGTTCAAAACGAtcctcattgttttatttattgtgatatttaattatactaTAGCAGCTGTACTCTTCCCAATTGGTCAGGTTTTCCCTGCATTAATATATGAGTGTTACATCACCCCTATAGGGTATGCCTTTGTGAACATGAGATCCTGCCTGCAGCCCCTGCTATATCTATACACTTCAGGACAATGTCCTTGCTTGAGAAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009568 True 1473 mRNA 0.43 3 41775209 41784537

Neighbor

gene id symbol gene type direction distance location
AMCG00009564 NA coding upstream 91514 41678552 ~ 41683695 (+)
AMCG00009556 NA coding upstream 186455 41586666 ~ 41588754 (+)
AMCG00009562 NA coding upstream 206377 41560388 ~ 41568832 (+)
AMCG00009554 NA coding upstream 265362 41504994 ~ 41509847 (+)
AMCG00009555 NA coding upstream 276404 41485230 ~ 41498805 (+)
AMCG00009569 NA coding downstream 48334 41832871 ~ 41844457 (+)
AMCG00009575 NA coding downstream 117296 41901833 ~ 41910118 (+)
AMCG00009577 NA coding downstream 167130 41951667 ~ 41960909 (+)
AMCG00009579 LOC107712727,LOC103384719 coding downstream 195000 41979537 ~ 42029964 (+)
AMCG00009578 NA coding downstream 251481 42036018 ~ 42042211 (+)
G57770 NA non-coding upstream 25065 41749555 ~ 41750144 (+)
G57690 NA non-coding upstream 274991 41499964 ~ 41500218 (+)
G57599 NA non-coding upstream 841999 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 945532 40829072 ~ 40829677 (+)
G57544 NA non-coding upstream 1431828 40339382 ~ 40343381 (+)
G57775 NA non-coding downstream 31384 41815921 ~ 41817795 (+)
G57792 NA non-coding downstream 54628 41839165 ~ 41839466 (+)
G57843 NA non-coding downstream 300742 42085279 ~ 42088145 (+)
G57940 NA non-coding downstream 617698 42402235 ~ 42402452 (+)
G57945 NA non-coding downstream 631053 42415590 ~ 42418109 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 176085 41596229 ~ 41599124 (+)
G57604 NA other upstream 780550 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 1670157 40086474 ~ 40105052 (+)
G57430 NA other upstream 1826009 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 2338192 39434900 ~ 39437017 (+)
G57830 NA other downstream 251481 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 1652453 43436990 ~ 43444420 (+)
G58324 NA other downstream 2148415 43932952 ~ 43935762 (+)
G58522 NA other downstream 2601960 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2777240 44561777 ~ 44570531 (+)

Expression


Co-expression Network