AMCG00009789


Basic Information

Item Value
gene id AMCG00009789
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 46177250 ~ 46182945 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009789
ATGGAGTTCCTGCCCTACAGGAAAGTGCAGGTGTCTGAGAGGGACTTCACTGtgctGTTCGTGCAGCGCAGTGGCCACAGTCCACGCTGGACTCTGGGACGCCGTGTTTTCTCTGCTCCGAGCCGGGACCTGCGAGAGCTGTGGGTCAGCGCTCTGAGGACCTGCCTGCAGCAGCACAtaagGTGTCGTCCCCAGCGGCTGCTTGTGTTTATCAACCCGTTCGGGGGGCGGGGCCATGGCCGCAAGATCTACCAATCACAGGTGTCACCACTGTTCGAGCTGGCCGGGATCAGCACACACGTActtgAGACGGAGCGAGCCAACCACGCCCGAGACCACATCCTGAAGAAGGACCTGAGCGGCTTTGAtggGTTGGTATGTGTGGGAGGGGATGGCATGTTCAGTGAGCTGATGCACGGGCTGATTGGCCGGACGCAGCAGGAGGCGGGCATCTCGGAAAACGACCCCTCGGCGACCCTGGAGCCCTGCAGTCTGCGCATCGGCATCATTCCGGCAGgcTCCACGGACTGTGTGTGTTTCGCCACCGTGGGTGTGAATGACCCTGTGACCTCTGCCCTGCATATCATCATAGgGGACAGCCAGCCCCTGGATGTGTGCTCTGTCCATCACCGGGATCAGCTGATGCGGTACTCCGTCTCCCTGGTGGGATACGGGTTCTACGGCGATGTGCTGGAGGAGAgggtgATGATGTTCCTCAGTAATCGCTCCTATCAGGGCACAGTGGAGTTCCAGCTGGCAGGCAACCAGCTGACCAGCCCCCGAGACAAGACCCGCTGCCTCTCTGGAGAGTGGCTGTGCAGTGTGAGTGACCTGTCATTCGACACCATCTCGCAGGAcagcttccagaccccagGGGGCTCCACTGAGGAGGGGGCGAGCAGTCCATGGCGGTCAGTGGAGGGCCGTTTCCGCGCGGTCAGTCTGACCTGCATGTCCAGTGCCTGTCCCAAGAGCCCAGCCGGCCTGTCGCCCTCCGCCCACCTGGCAGACGGCACGGCCGACCTCATCCTGGTGCGCGACTGCTCCCCCTGCGGCTTCCTCACGCACCTGAGCCGGCACACCAACAGCAAGGACCAGtttGACCTGCCCTTCGTGGACGTGTACCGAGTGAAGGCCCTGCGCTTCACACCCCCCTGCGGagatgaggatgaggaggagggggaggtggagagagggagggagcctTCGAGTCAGAGGAAGAAGCGGCACctgtgtggggggggctgtGGAGACGCACCCCCTCGC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0009987 cellular process biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009789 True 1266 mRNA 0.63 11 46177250 46182945

Neighbor

gene id symbol gene type direction distance location
AMCG00009790 naa10,LOC106572706,LOC106567016 coding downstream 4749 46169765 ~ 46172501 (-)
AMCG00009787 NA coding downstream 10432 46162271 ~ 46166818 (-)
AMCG00009788 NA coding downstream 25556 46129110 ~ 46151694 (-)
AMCG00009783 NA coding downstream 124354 46033114 ~ 46052896 (-)
AMCG00009779 LOC102797708 coding downstream 271912 45897094 ~ 45905338 (-)
AMCG00009791 NA coding upstream 4238 46187183 ~ 46204678 (-)
AMCG00009792 sps2 coding upstream 37290 46220235 ~ 46223357 (-)
G59244 NA non-coding downstream 1282 46122275 ~ 46175968 (-)
G59236 NA non-coding downstream 64569 46061493 ~ 46112681 (-)
G59202 NA non-coding downstream 213195 45908581 ~ 45964055 (-)
G59191 NA non-coding downstream 269108 45907254 ~ 45908142 (-)
G59099 NA non-coding downstream 414110 45759711 ~ 45763140 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other downstream 419299 45748676 ~ 45757951 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other downstream 534506 45637747 ~ 45642744 (-)
AMCG00009755 NA other downstream 711873 45458743 ~ 45465377 (-)
AMCG00009748 NA other downstream 851195 45320757 ~ 45326055 (-)
AMCG00009742 NA other downstream 899653 45251637 ~ 45277597 (-)

Expression


Co-expression Network