AMCG00009792 (sps2)


Basic Information

Item Value
gene id AMCG00009792
gene name sps2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 46220235 ~ 46223357 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009792
ATGCTGGGCTGTGTTGCAGGGATCGGGATGGACTCGTGTGTGACTCCTCTGCGGCACGGTGGGCTCTCGCTGGTCCAGACCACTGACTTCTTCTACCCGCTGGTGGACGACCCCTACATGATGTGCGATGTAACTGTCCCGCTGCGCTGCCCCCCCCAGGGCCGCATCGCCTGTGCCAACGTGCTCAGTGACCTGTACGCCATGGGCATCACAGACTGCGACAACATGCTGATGCTGCTGAGTGTGAGCCAGAAGATGAATGAGAAGGAGCGCGAGCGAGTGATGCCCCTGATGATCCGTGGTTTCCGAGATGCTGCGGAGGAGGGCGGGACCTCGGTGACGGGCGGCCAGACGGTGCTGAACCCCTGGATCATCATCGGGGGAGTGGCAACTGTGGTGTGCCAGCCCAACGACTTTATCATgccgGACAGCGCGGTGCCGGGGGACGTGCTGGTGTTAACCAAGCCTCTGGGGACGCAGGTGGCCGTGAACGCGCACCAGTGGCTGGACATGCCTGACAGGTGGAATAAGATCAAGCTGGTGGTGTCCAGGGAGGAGGTGGAGCTGGCGTACCAGGAGGCCATGTTCAATATGGCCATGCTCAATCGCACAGCGGCCGGGCTGATGCATACCTTCAACGCTCACGCTGCGACGGACGTGACAGGCTTCGGGATCCTGGGTCACGCGCAGAATCTGGCACAGTGCCAGCGCAGCGACGTCGCCTTCGTCATCCACAACCTGCCTGTCATCGCCAAGATGGCTGCCGTCAGCAAGGCCTGCCTGCTGATCTGCCTGCCGCGGGAGCAGGCTGCGCGCTTCTGTGCCGAGGTGAAGGCGCCACGCTACGGCGAGGGCCACCAGGCCTGGATCATCGGCATCGTGGAGAAGGGCGGCCGCAGCGCCCGCATCATTGACAAGCCACGCATCATCGAGGTGGCGCCGCGGGGGGGCGGTGGCTGCGGGGGAGACGGCAACACCAACACCACGCCCAGCCCCGAGACGCAGCCGCCGCTGTCCTGA

Function

symbol description
sps2 Predicted to enable purine nucleotide binding activity and selenide, water dikinase activity. Predicted to be involved in selenocysteine biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including egg chamber; embryonic/larval gut; midgut primordium; and presumptive embryonic/larval system. Orthologous to human SEPHS1 (selenophosphate synthetase 1) and SEPHS2 (selenophosphate synthetase 2).

NR:

description
selenide water dikinase 2, partial

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005886 plasma membrane cellular_component
GO:0031965 nuclear membrane cellular_component
GO:0004756 selenide, water dikinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009792 True 1020 mRNA 0.64 7 46220235 46223357

Neighbor

gene id symbol gene type direction distance location
AMCG00009791 NA coding downstream 15557 46187183 ~ 46204678 (-)
AMCG00009789 NA coding downstream 37290 46177250 ~ 46182945 (-)
AMCG00009790 naa10,LOC106572706,LOC106567016 coding downstream 47734 46169765 ~ 46172501 (-)
AMCG00009787 NA coding downstream 53417 46162271 ~ 46166818 (-)
AMCG00009788 NA coding downstream 68541 46129110 ~ 46151694 (-)
G59244 NA non-coding downstream 44267 46122275 ~ 46175968 (-)
G59236 NA non-coding downstream 107554 46061493 ~ 46112681 (-)
G59202 NA non-coding downstream 256180 45908581 ~ 45964055 (-)
G59191 NA non-coding downstream 312093 45907254 ~ 45908142 (-)
G59099 NA non-coding downstream 457095 45759711 ~ 45763140 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other downstream 462284 45748676 ~ 45757951 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other downstream 577491 45637747 ~ 45642744 (-)
AMCG00009755 NA other downstream 754858 45458743 ~ 45465377 (-)
AMCG00009748 NA other downstream 894180 45320757 ~ 45326055 (-)
AMCG00009742 NA other downstream 942638 45251637 ~ 45277597 (-)

Expression


Co-expression Network