RNA id: AMCG00009792


Basic Information

Item Value
RNA id AMCG00009792
length 1020
RNA type mRNA
GC content 0.64
exon number 7
gene id AMCG00009792
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 46220235 ~ 46223357 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGGGCTGTGTTGCAGGGATCGGGATGGACTCGTGTGTGACTCCTCTGCGGCACGGTGGGCTCTCGCTGGTCCAGACCACTGACTTCTTCTACCCGCTGGTGGACGACCCCTACATGATGTGCGATGTAACTGTCCCGCTGCGCTGCCCCCCCCAGGGCCGCATCGCCTGTGCCAACGTGCTCAGTGACCTGTACGCCATGGGCATCACAGACTGCGACAACATGCTGATGCTGCTGAGTGTGAGCCAGAAGATGAATGAGAAGGAGCGCGAGCGAGTGATGCCCCTGATGATCCGTGGTTTCCGAGATGCTGCGGAGGAGGGCGGGACCTCGGTGACGGGCGGCCAGACGGTGCTGAACCCCTGGATCATCATCGGGGGAGTGGCAACTGTGGTGTGCCAGCCCAACGACTTTATCATgccgGACAGCGCGGTGCCGGGGGACGTGCTGGTGTTAACCAAGCCTCTGGGGACGCAGGTGGCCGTGAACGCGCACCAGTGGCTGGACATGCCTGACAGGTGGAATAAGATCAAGCTGGTGGTGTCCAGGGAGGAGGTGGAGCTGGCGTACCAGGAGGCCATGTTCAATATGGCCATGCTCAATCGCACAGCGGCCGGGCTGATGCATACCTTCAACGCTCACGCTGCGACGGACGTGACAGGCTTCGGGATCCTGGGTCACGCGCAGAATCTGGCACAGTGCCAGCGCAGCGACGTCGCCTTCGTCATCCACAACCTGCCTGTCATCGCCAAGATGGCTGCCGTCAGCAAGGCCTGCCTGCTGATCTGCCTGCCGCGGGAGCAGGCTGCGCGCTTCTGTGCCGAGGTGAAGGCGCCACGCTACGGCGAGGGCCACCAGGCCTGGATCATCGGCATCGTGGAGAAGGGCGGCCGCAGCGCCCGCATCATTGACAAGCCACGCATCATCGAGGTGGCGCCGCGGGGGGGCGGTGGCTGCGGGGGAGACGGCAACACCAACACCACGCCCAGCCCCGAGACGCAGCCGCCGCTGTCCTGA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005886 plasma membrane cellular_component
GO:0031965 nuclear membrane cellular_component
GO:0004756 selenide, water dikinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74082 lncRNA downstream 44267 46122275 ~ 46175968 (-) True G59244
TU74073 lncRNA downstream 107554 46061493 ~ 46112681 (-) True G59236
TU74025 lncRNA downstream 256180 45908581 ~ 45964055 (-) False G59202
TU74023 lncRNA downstream 304367 45908581 ~ 45915868 (-) True G59202
TU74008 lncRNA downstream 312093 45907254 ~ 45908142 (-) True G59191
AMCG00009791 mRNA downstream 15557 46187183 ~ 46204678 (-) True AMCG00009791
AMCG00009789 mRNA downstream 37290 46177250 ~ 46182945 (-) True AMCG00009789
AMCG00009790 mRNA downstream 47734 46169765 ~ 46172501 (-) True AMCG00009790
AMCG00009787 mRNA downstream 53417 46162271 ~ 46166818 (-) True AMCG00009787
AMCG00009788 mRNA downstream 68541 46129110 ~ 46151694 (-) True AMCG00009788
TU73631 other downstream 896285 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other downstream 896913 45320843 ~ 45323322 (-) False AMCG00009748
TU73318 other downstream 1435101 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 1653401 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 1677426 44541894 ~ 44542809 (-) True G58584

Expression Profile