G53668


Basic Information

Item Value
gene id G53668
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19621812 ~ 19622202 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU67119
ctcgtctgttggatcggaccacacaggccagccttcgctccccacgtgcatcaatgagccttggccgcccatgaccctgtcgccggttcaccgcttttccttccttgaaccacttttgataggtactgaccactgcagactgggaacaccccacaagagctgcagttttggagatgttctgacccagtcatctagccatcacaatttgacccttgtcaaagtcgctcagatccttacgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataatgagattatcagtgttattcacttcacctgtcagtggtcataatgttatggctgatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67119 True 391 lncRNA 0.49 1 19621812 19622202

Neighbor

gene id symbol gene type direction distance location
AMCG00009021 sox2,LOC106584342,LOC107655276 coding downstream 360701 19260287 ~ 19261111 (-)
AMCG00009020 NA coding downstream 1148111 18472634 ~ 18473701 (-)
AMCG00009017 NA coding downstream 1211690 18404514 ~ 18410122 (-)
AMCG00009019 eif4a2,LOC105889495,LOC107568626 coding downstream 1219566 18396177 ~ 18402246 (-)
AMCG00009018 eif4a2,LOC107103884,LOC107593804 coding downstream 1239421 18377434 ~ 18382391 (-)
AMCG00009023 NA coding upstream 100739 19722941 ~ 19728530 (-)
AMCG00009024 NA coding upstream 117086 19739288 ~ 19739999 (-)
AMCG00009028 dcun1d1,LOC107656862,LOC107722250,LOC107568628 coding upstream 349313 19971515 ~ 20010245 (-)
AMCG00009030 NA coding upstream 486744 20108946 ~ 20110200 (-)
AMCG00009031 NA coding upstream 525895 20148097 ~ 20150492 (-)
G53662 NA non-coding downstream 51752 19569823 ~ 19570060 (-)
G53632 NA non-coding downstream 270000 19351464 ~ 19351812 (-)
G53629 NA non-coding downstream 273784 19347785 ~ 19348028 (-)
G53623 NA non-coding downstream 332792 19229214 ~ 19289020 (-)
G53613 NA non-coding downstream 494793 19126742 ~ 19127019 (-)
G53722 NA non-coding upstream 237617 19859819 ~ 19937442 (-)
G53746 NA non-coding upstream 334511 19956713 ~ 19958285 (-)
G53748 NA non-coding upstream 337371 19959573 ~ 19960354 (-)
G53751 NA non-coding upstream 370831 19993033 ~ 19993252 (-)
G53752 NA non-coding upstream 383687 20005889 ~ 20006091 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other downstream 1753116 17868386 ~ 17868696 (-)
AMCG00009001 NA other downstream 1874769 17724719 ~ 17747043 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other downstream 2708513 16823795 ~ 16913299 (-)
G53017 NA other downstream 3007351 16613224 ~ 16614461 (-)
G52951 NA other downstream 3216686 16404710 ~ 16405126 (-)
AMCG00009029 NA other upstream 338825 19961027 ~ 19970276 (-)
AMCG00009027 NA other upstream 439322 20061524 ~ 20062179 (-)
G53809 NA other upstream 557597 20179799 ~ 20271814 (-)
G54003 LOC107575789 other upstream 2560886 22183088 ~ 22183565 (-)
AMCG00009060 hltf other upstream 4203027 23825229 ~ 23863035 (-)

Expression


Co-expression Network