G53613


Basic Information

Item Value
gene id G53613
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19126742 ~ 19127019 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU67050
gccacaagattctacgtcattttcctataaagcttcactcatgtttgtaaacattaagttctcactgaaggaattccctgacgtggtgcttccaagccggcttgattaaagttctatttgctttatctcaatgACTTTTCCACTTATTTCAGAGATGGGTTCTACAAGTatgtcaaaatgttatgtttaatcagtgcaattttacagaATAATAAACGACTagattacaagtagagtctgaacagatgtttttagtaatcgctggaaggaggtcaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67050 True 278 lncRNA 0.37 1 19126742 19127019

Neighbor

gene id symbol gene type direction distance location
AMCG00009020 NA coding downstream 653041 18472634 ~ 18473701 (-)
AMCG00009017 NA coding downstream 716620 18404514 ~ 18410122 (-)
AMCG00009019 eif4a2,LOC105889495,LOC107568626 coding downstream 724496 18396177 ~ 18402246 (-)
AMCG00009018 eif4a2,LOC107103884,LOC107593804 coding downstream 744351 18377434 ~ 18382391 (-)
AMCG00009011 LOC105011705,LOC106613920 coding downstream 838570 18272618 ~ 18288172 (-)
AMCG00009021 sox2,LOC106584342,LOC107655276 coding upstream 133268 19260287 ~ 19261111 (-)
AMCG00009023 NA coding upstream 595922 19722941 ~ 19728530 (-)
AMCG00009024 NA coding upstream 612269 19739288 ~ 19739999 (-)
AMCG00009028 dcun1d1,LOC107656862,LOC107722250,LOC107568628 coding upstream 844496 19971515 ~ 20010245 (-)
AMCG00009030 NA coding upstream 981927 20108946 ~ 20110200 (-)
G53577 NA non-coding downstream 291369 18835136 ~ 18835373 (-)
G53568 NA non-coding downstream 404368 18722110 ~ 18722374 (-)
G53556 NA non-coding downstream 467109 18659351 ~ 18659633 (-)
G53543 NA non-coding downstream 524791 18601713 ~ 18601951 (-)
G53478 NA non-coding downstream 818743 18307437 ~ 18307999 (-)
G53623 NA non-coding upstream 102195 19229214 ~ 19289020 (-)
G53629 NA non-coding upstream 220766 19347785 ~ 19348028 (-)
G53632 NA non-coding upstream 224445 19351464 ~ 19351812 (-)
G53662 NA non-coding upstream 442804 19569823 ~ 19570060 (-)
G53668 NA non-coding upstream 494793 19621812 ~ 19622202 (-)
G53355 lrrc4b,LOC107677294,LOC107556667 other downstream 1258046 17868386 ~ 17868696 (-)
AMCG00009001 NA other downstream 1379699 17724719 ~ 17747043 (-)
AMCG00008989 prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 other downstream 2213443 16823795 ~ 16913299 (-)
G53017 NA other downstream 2512281 16613224 ~ 16614461 (-)
G52951 NA other downstream 2721616 16404710 ~ 16405126 (-)
AMCG00009029 NA other upstream 834008 19961027 ~ 19970276 (-)
AMCG00009027 NA other upstream 934505 20061524 ~ 20062179 (-)
G53809 NA other upstream 1052780 20179799 ~ 20271814 (-)
G54003 LOC107575789 other upstream 3056069 22183088 ~ 22183565 (-)
AMCG00009060 hltf other upstream 4698210 23825229 ~ 23863035 (-)

Expression


Co-expression Network