AMCG00010791


Basic Information

Item Value
gene id AMCG00010791
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 151074 ~ 156797 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010791
TATCGGGCATCGATTACTCTGCCCTTCCTGGAAGGACATGCATTGCTCCTGTCTGATGAAAATGGCCGCCACCAGGTAGGGACGGCAGCGGGGGCATTGCACGGAGCATCGCACACTGTCAAGGACTTTGATTAAGTGAAGCGTCCGGCGTGCGAAGCCGAGGATGCTCTTAAGAAGGGCGCTGAGAGCCGCGTCTTGTGTCCGGGAATGGAGCTCCATCGCCGTCGCTGCGCAGAGCAGCGTGCGGCCGGCAGGACGGGCTCCCAGCGTGGCTGCGGTCCGAGCCGTGTCGGAGCGGTGGACGAGCGGGCAAGGGCTCCCCGGTGGTAACGGGAGCTTCGCAGTCCAGCCTGTCAGGAGTTACGCTCGAGCGATACGGAAGAAGCAAGCCTCTCCCAGTCAGCTGAGCGACCTGCCCCCCACCCTGCTGAAGAAGGAGTTTGCTGCGGTTCAGATTGCCCAAACGACTGATGCTGTCGTCCGGAAGCTGCTGTCCCTGGAGCTGGCGAGCCACaAGGAGAAAGTCGATCTCAAGAAAGAGGAGCTGGTGGCCAAAGTGCGGCGGAGCGAAGCCGACTGCGGCTCCACAGAAGACAAGGCCAATCGGCGGCGCATGCTCATGGCCGTGGACCGGAGGAAGAAGCTGCTCAAGTACCTGCGGCGCACGCGCTACGACGCCTTCGAGAGCGTGTGTGACCGGCTGGGCATCACCTACTCCTTCCCCCCCGAGTACTACCGGCGTGTCACGCGGCGCTGGGCCGCCAAGAAGGCGCTGTGCGTGAAGGTCTTCAACGAAGTGAAGAAGCTGAAAGCGGCCAAGAGGATGACAAGGCAGGAAGCCGAGGCACAGTGAGGGGCAGCGCAGACACCGTCTGGGCCCCCGGGGACCCTGGTTTAGAGTCACATGACTCAAGCACCGACTTAGAAACTGGATACACTGTTTATTTCCAATCTGTCGCCACTCAAAAccctcaaaaataaatgttttcttcctttaaCCCATTTCTTCATTCTGTCTGAATATTTATTACTGGTGTGAAACCCTGAGTCTTGCTgaaagaatttttttttttttgccttttaatCATTTCCATTTGGTTATTAAAAGTGCAATTGACATTCACTCAACAGAGTATTGAAAACTACGGGCGTGCCATTATCCATCGATGCAGCACAACACGAGGGCCGTCCGATCAGTCTCGCACTGTGCTTCTGACTGAAGTAGCACAGACGACTGAATACAGGCCAGCTGATCAATTACAAAGTGCCACggtgtgtttgtgattttatttaattactgttcTGAAGCAGCACAGTTCTGAACA

Function

GO: NA

KEGG:

id description
K02956 RP-S15, MRPS15, rpsO; small subunit ribosomal protein S15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010791 True 1325 mRNA 0.55 7 151074 156797

Neighbor

gene id symbol gene type direction distance location
AMCG00010790 NA coding downstream 16980 133732 ~ 134094 (-)
AMCG00010796 NA coding downstream 17750 126979 ~ 133324 (-)
AMCG00010792 stk40 coding downstream 24475 114818 ~ 126599 (-)
AMCG00010795 NA coding downstream 38558 73277 ~ 112516 (-)
AMCG00010793 NA coding downstream 81479 43198 ~ 69595 (-)
AMCG00010797 NA coding upstream 693 157490 ~ 193075 (-)
AMCG00010798 grik3 coding upstream 408434 565231 ~ 577174 (-)
AMCG00010799 grik3,LOC106605119,LOC106583195 coding upstream 431059 587856 ~ 629893 (-)
AMCG00010802 NA coding upstream 778386 935183 ~ 943466 (-)
AMCG00010807 maneal,LOC105903681,LOC106583256,LOC102777073 coding upstream 885204 1042001 ~ 1056921 (-)
G102332 NA non-coding downstream 19492 131350 ~ 131582 (-)
G102360 NA non-coding upstream 130476 287273 ~ 287693 (-)
G102362 NA non-coding upstream 130952 287749 ~ 287971 (-)
G102367 NA non-coding upstream 330476 487273 ~ 487531 (-)
G102372 NA non-coding upstream 403637 560434 ~ 560797 (-)
G102432 NA non-coding upstream 809165 965962 ~ 966216 (-)
AMCG00010794 NA other downstream 1245 136369 ~ 149829 (-)
G102434 NA other upstream 818756 975553 ~ 978127 (-)
AMCG00010806 NA other upstream 877033 1033830 ~ 1034874 (-)
AMCG00010843 NA other upstream 2325077 2481874 ~ 2496446 (-)
G102762 NA other upstream 2583019 2739816 ~ 2778023 (-)
G102774 NA other upstream 2601681 2758478 ~ 2761264 (-)

Expression


Co-expression Network