AMCG00010797


Basic Information

Item Value
gene id AMCG00010797
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 157490 ~ 193075 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010797
GCCGGAGTGACGCGGCTCAGACCCGGGCGGTGCGATCAGTCTCCGGCtcagaggacagacagagacgCCGCTGTTTGACACAGTAGCTGTGTTACTTGTGTAGGTGTTATCTGGACCGGAGCACTGGGGCCGCGCTGAGGACCCACACACGATATCAGATGACACACACTGTGGCTTAAACTGGGCAGAGCTCAAACAGAGAGAGCAACAGAGCGCTCTCCTTGAATGGAAATACTGGCACCATTCTGtggtaaagaaagaaagaccaGGAGTACTTTCATCAGATGGGACACAGgCTTTTGTGCCATGCCTTCTCCATTAAAATCTCAGCTTTTGGTTTTGATGGTAATGATGTTGGACTCTGCTCAAGTTACAGAGGCCTCAGGATGTGCTGCAATATCAGTTGAGTCATCTGTGGTTGTCCTGGGTTCGACGCTGAGAGCTTCCTGTGCTGTCAGAGACAATTGCACTTTAGCTGAAGGGCCGGATGTCCAGCTGGAATGGCGTCTCAATGGCAGCATCGTCCCCCGGAGTCGATACGTCCAGCCAGCCGGCAGCAGAGTCTCCGCACTGTCCCTCCCTGGTTTCAATGCCACCCAGGGGTATCTCGCCTGTTTCCTAGTGCATCAGGGAGAGCCCCAGATGACTGATGAGGTTGAGATTAAAGCTGGGTATCCGCCTTCAAAGCCCATGAACCTGAGCTGCATGACGAATTTAACTAATCCGCCCACATTCACTTGCACGTGGATGCCTGGAAGAGAGACGCACCTCCCGACCCGGTTCTCTCTGCACACCAGAGATAAGGTGGGAAATCCTTCAAAGTCCTTCATGCCGCCCGATGGAAGCAACTCCTACTCCATTCCGCGCTTGAGCTTCCACCTGTTCTCTGAGATGGAGGTCTTCGTGACCGCAGTGAACGCCCTGGGGAGCGCCACGTCCGATTCTCTGTTTCAGGATCCCATGGACGCTGTGAAATTGGATCCTCCGAATATCCAAAGCATCCGAACAGAGGACGGGAAATATGGCTGCCTAATAATCGAGTGGACTGTATCTGACTCGCTGGACTGGGTTGGAGAATTGGAAGTTGATCTCCGTTTCAAAGCTACGGACAGCGAGCGCTGGACGACAGAAAGAAAAACGGTGGTGGATTGGAAACCCGTCCAGCAGTGTGCTTTGCTCCACGGGACAGAGTACGAGTTCCTCATGCGTGTGCGACTCGATCCCGGGTTCTGGAGTGACTGGAGCCGAGGATCAAAGGGCTACATGCTGGAAAAGGCTCCCTCCGGAAAACTCAGCTTGTGGTGGAGAATGATGGATGAACAATCCCGAGTGTTGCAGCTGGTCTGGAAGccTACAAGCCAGTTCAAAGCCAACAGCAAAAACGTTTCCTACCACGTTTTCCATGGTTCGCTGTCAGCCAGAACAACCTTTTGTAGAACCTCAGAAATGCACTGCGAAGCCTGTCTGCCCCGAGGAACCAAGAAGCTGTACATCAGCGCGATGAACGCAGCAGGAGAATCCAACCCGGCTGAGGTCACGTTCTACCAGGACAGAGCTCTGGAGCCCGTGTCTGGCATCAGTGTGTCATCATATCGACACACTGGCCTCTGGGTTCACTGGACACCCCTAGCATCACAAGTTGTCAACTATGTGGTCGAATGGTGTGTCGTGTCGGACACAGAGCCCTGCCTGATCTCTTTCCTAGTGGTGCCGAGGAACCACACGAGCGCCGCGATCACCGaaaaCGTGGAGCCCTACAGACTGTATAGAGTCTCTGTGTATCCGCTGTACAGGAATGGGATCGGACGGCCTCTTGCTGCAGAAGGATATTCAGAGCAGAAGGCCCCCTCGACAGCTCCAGCGATGGAAGTAGGAGCTATAACCGACTCCCAGGTGGAGCTGAGCTGGCAGGAAATCCCAGTGGATGAGAGGAACGGATTCATCCGGAGCTATACGGTTTTCTACTCAGACGAGGGGGGCGACACTGAGGGAGTGATTGTCGAATCTCCGCAGAGACACGTGACCCTCAGAAACCTGAAGCCCTCGTCGCTGTACAAGGTGTTCATCATGGCAAGCTCTGAGGGGGGGAGTGCGAATGGGACGCTCATCATGTTCAGAGCAAGCGAAGTGGGGGTCAGATCAGGGGTCAGATCAGGGGACTGCGGGCTCAGGGCATCAGCTGCTCCATCTGGAAGCACGTTCTCCCATCGTCTGAAGCTGCAGTTTTGGCCGATGGTCCCAGACCCAGCAAACAGCAGCCTGCATAAGTGGACCCAGACTGAAACTCTGAAGGATATTAACCCTTTCCAAGACCTGCAAGACCCCTCCCCAGTGAACATCTCCAGGTTCAGTATTCTAGATATTTCTGGACACAAGTCAGAAAAGGAGGAACAGAAACCTGATGTCACGGCTGTGGATGGACCCTGGCCATCACAGGGCCGCTCCATCGGGCTGGACGGCACCCCCCCCGCCTCCGCCCCCTTCGAGAGGCGCTGTGAAGGAACTCAGGCTAAGGACTACCTGAATTACTCGGGGGTGCCCTATGCCACCGTGGTGTTCAGCGCCTACAAAAGCCAGCAGGGCGCCCCGCCGGCTTACCTCCGGTCCGACTCCACTCAGCCGCTCCTGCAGGACCTGTCCCCGAGCCCGAAGCAGTACGAGAACCTGTGGTTCAGCGCCAATAAAGATGAGGACGCCTCCTTTATAGGGAGTCAAGTGACCAAAGACAAGGAGGTGGGgagcagtgcattctgggatgaCTTCCCCCTGCTTAGTGCCCTGAAAATAGAGGAGACTGACATTGAGAGTGTTTCCTAATTATATAGGGGGCAAGAGGTCCCTACTCTTGATCTCTTGAGTGATATGAGAGACGTTGTCTATCATTTTCAGAAGCAGTGATGCTTTCCCGTAGTGCATCTCTGTGGCTCTCGAGGCATCGGCTCACAGCAGGAGACTCAGATCTCGAAATGAGCGGCCGGGGCTCGACAACCACAGCAGCCAACTCAGCAACAACTGTGTCTGAAAGTGTCCGCACCCGTCGCTCTGCTCCGATTCATTCCGCTTCAGAAGTTTTTGGGCATTAAACTATACCGATGTGTTTGTTAAGCGCTGGTTTGGCCGAGAGGCATCTGTACATGGAATTGAGAGGACCATGCGATCAGTACAGTGTACTTACAACTAAACAAATCTGTGGATGACGTACTTCTTCTGATCGCAGCTGTGCCTGCCAGGGCGTCGGCGCAGGGATTGTTCAGCgggttttgttgttcttgttttttaaatctcccCAATGGAAGTAGGGagatcacattttgttttatttgtttgtacagTTTAGTGTCAGCGTGTCAGAATGCTCACcatgagggaaaataaaatgcaaatatagcTCAGCTGTTGGTTCACACATTTAGCATTGCTTGCATGTGCACAAAGGTAtcttttttgttaatgttacaTTCttgtaaactgaaataatacacCAAATGGTGTTCAAGGTCAATGAACAATACACTACCacacaaatgaatacaataacCAGTCACGGGTTTCTTCCTTCAGTGTCTATGAGAAATATGATTATAAATGCCTAAAGGTGTGCTGAATGTATGTTACTTAAATTCAGCAATAAGACtttgaacaatttaaaacaatacaaatctctATGGGAAGTCTTGCTAAGTGTACAAATACTATTTTAACCAATAGTAATTCAGTAAGTAAGTAATCCCATAAAGAGTGAATATCACAGAAACAGTAAAGGAGGTCATTATAATGTCGTTATACTTTGAAACTGAGGTTTTCCAAAGCACatgatatttacttttgtgttacaaaaaaataagtcaatTCATATTTACACATAAATGTGAGgaatttattacattatatttcaggTAATGTAGACAATGTGTGAATAATCTGAATGTGCTCTATTTGTGTTGCTGAAGTGATGCCACTGTAATATTACACCAACTTTAAATCTCCACAGCAAACCATTGAACGTGCAATATAAGCATAACTGGCCTGGAACAGTTGGCAACAATTGATTCAGTGGCTCctgtattacattaaatttcCTTTCTTCAATTCCTGCTGCCGTGTCTGATTTCCCTACCTCATgttattaacataatttaaaacatagttAATAGGCAGTACATGTTAAAAAACTAACTTAATCACATCTGATTGGTTACAGCAGGGCTGCACAGTCACACCTGATTGGCTACAGCAGGGCTGCACAACTCTGGCCCTTAGGACTACAGGGTGCTCTGGGTTTTTATGCCTTTTGCCTTCATTATTAACTAAGTGGACTCATTAAACTGGACCCCTCTAACTTTTCCCTGGTATGAAAGGATCTATAAAATGTATCGGACTGCATTTCACAACAACATTGGTgcactgtaattatttgtatgattGTTAATAGTATGGATgcagtgatatatatatatatcggccAGCTATCCGTATCAGTCGATATTGGCAAAATGTAAAGACTACTGgccgattgctttaaaatgatattgCTGACGTCTAAATACGCATCCAATTTGCTCTACTTGTGTGCCTTTAAACACATGTGGATGGCATGCACGAACTGGGATGGTACTTAAGCGCCAGGCTGCTGTGTTGGGCCTGGTTAGACGAGAGTGCCGCAGTGTCAATCAGGACAGCAGCGGCCATTTGTAACACATGTTCCACTGAAGTGTCAACAGGAAGCTTGGGAAACTATTTCAACACATCAATTTCAGTAGCAAAATCTACTTTTACTGAATAATATTTATatccaaatgtttttcttatgatctatatgtataattagtataattattattgctcaGTTGTTCCAGTTGGCAATGCActgttatgtttgtgtgtaaactACATAAGatggcaatttatttttaaggagcatttttaatatattggtcCATTTGACTGGTTTTGGTGCTTGTACTAGGCAGCCTAATTTGAAATGTTGGCACTTCTTGTGTTAAACCATCCCTGAACAAGTTTGAAACACACGATTACGGGTCAAAAtggaaagacaaaataaataaacaaaataaataaacaaaaataggtCTCTGGGAGCCGCACGTTGGGACCCCTGACCCGACCCAACCCCCTAGGCAGCTTGTTCATAATCTGTTGCAGTTCAGTTAATAAAGCCTAACACAATTTACATCCAGGGATTGTAGCTACAATTACACATAAAGAgagatgtgtattttttttattaattataatttatttttctactcaTTGTgcctggttttttttttttcaataaatggGAAAACAACGTTTGTTGTGGAAGAATGTTACAGAAATTAATACTAAAAGTTGTTCCATTACTTTGTagttgtataatttaatttgtgttaattaaaaatcataatcaaaagcaaaaacatgatttatttgatGCCAGAGAACaaatacgtaaataaataacaaaatcgGCATCAACGGCCACTTGTACTATATGAATATCGTCTatcagctcagaattgtcaTATCAGTGCATCCCTAGTTAATAGTAGTAGTGTTAGTAGTAGAAAGTATCAGTATAAGTTGTACTAGCAGTATTATTGCTGTGTCTtcacatatttctgtttataCGTTGCATATACTtatatttgatttcttttttgttgttgttgttctaagtgcatttctgtattttttattttattttcctcaatgATTTGAATAAAGCCTACTGCTGTTTGATTGTCATACTATGGCAGAATTTGAATAAACTGtagtgtttgtttctttattctgTGAATGGGGGGGGTCCTTTTCCTCTGTTTTGTTGTGGGTGGAAGTATTACAGGAAAGCTCATTTGTATGGATTACAATATCATTAagggttgtgtgttttgaataaagAGTTGTTTAAAAC

Function

GO: NA

KEGG:

id description
K05061 CSF3R, CD114; granulocyte colony-stimulating factor receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010797 True 5917 mRNA 0.45 18 157490 193075

Neighbor

gene id symbol gene type direction distance location
AMCG00010791 NA coding downstream 693 151074 ~ 156797 (-)
AMCG00010790 NA coding downstream 23396 133732 ~ 134094 (-)
AMCG00010796 NA coding downstream 24166 126979 ~ 133324 (-)
AMCG00010792 stk40 coding downstream 30891 114818 ~ 126599 (-)
AMCG00010795 NA coding downstream 44974 73277 ~ 112516 (-)
AMCG00010798 grik3 coding upstream 372156 565231 ~ 577174 (-)
AMCG00010799 grik3,LOC106605119,LOC106583195 coding upstream 394781 587856 ~ 629893 (-)
AMCG00010802 NA coding upstream 742108 935183 ~ 943466 (-)
AMCG00010807 maneal,LOC105903681,LOC106583256,LOC102777073 coding upstream 848926 1042001 ~ 1056921 (-)
AMCG00010813 NA coding upstream 939695 1132770 ~ 1136837 (-)
G102332 NA non-coding downstream 25908 131350 ~ 131582 (-)
G102360 NA non-coding upstream 94198 287273 ~ 287693 (-)
G102362 NA non-coding upstream 94674 287749 ~ 287971 (-)
G102367 NA non-coding upstream 294198 487273 ~ 487531 (-)
G102372 NA non-coding upstream 367359 560434 ~ 560797 (-)
G102432 NA non-coding upstream 772887 965962 ~ 966216 (-)
AMCG00010794 NA other downstream 7661 136369 ~ 149829 (-)
G102434 NA other upstream 782478 975553 ~ 978127 (-)
AMCG00010806 NA other upstream 840755 1033830 ~ 1034874 (-)
AMCG00010843 NA other upstream 2288799 2481874 ~ 2496446 (-)
G102762 NA other upstream 2546741 2739816 ~ 2778023 (-)
G102774 NA other upstream 2565403 2758478 ~ 2761264 (-)

Expression


Co-expression Network