AMCG00011266


Basic Information

Item Value
gene id AMCG00011266
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16000144 ~ 16004390 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011266
CAAGTCGCCTGGCTGCACAGTGCTCTTGTGAAACCTAATTTCCTAATTTTGAAACCATGCAGTCGTCTGAGGAAACCTCGCACAACGCTGCCGAAGAAAAGGGCAACATGTCTGCTTCGAAAAGAAGAGCAGAAATAAGGAGGAGAAAACTGCTGATGAATTCGGAAGACAGGATGAACAGGATCATGGGCTTCAATAAGAGCGACGCAGACAGCAACGATGACAGACATGCGACAGAGCTCAGAATCCCTCCGGATCACGACAGGGCAGAGGTCCTGTCCCTGTCGGCCCCGTCCAAGAGACTTCCGGTTTTCCAACATGAGATCGGGGACGCTAATCACCACATTGATGTTCCTGAAAGGAAGGGGTCCCCGCTACTGGAGGGCAGGGAGTCTCTTGCCCGGGGTTCGGAGAGTGATGGCGGTGCGGAGCTGAGGCAGAGGCCCCGGGGGGAACTCCCGGCCGACGGAGTCCCTCGCTCCCCACGCCGGGGCCTGCAGCAGTACTTATCGCGCTTTGACGAGGCCATGAAGTTGCGCAGCCAGCTGATCAGCGAGAAACCAGTCCAGGACAACGGCTCGGGCCCGGAGGAGATGGATGCCTTCCGCCTCTTCAGGCTGCTGGGCAGCGTGCTGCTGGCCATCGCGGTCAGGGTGTTTGTCTGCAAGTACCTGggggagaaaaaaatcagGACCACAGTATTGACGGCTGCCCTGCTGCTCTCGGGAATCCCTGCTGAAGTCATCAACCGCTCCATGGACACTTACAGCAAAATGGGGGATGTCTTCACTGACCTGTGTGTCTACTTCTTCACTTTCATCGTGTGTCACGAGATGTTGGTCCTCCTGGGTTCTGAAATCCCCTGAGAGTCTTGTGTTGCTCTGCTCGATGTGTGCTCCTCTAAATCCCCCGGCTGATGCAGTACatcaccccctcccctcccctcccttttCCAACAGTGCGAGTGGCGGTGAAAGACAGATGTCTGGACCGCATCGGCTCTGGAACAGTGTGGTTTCAATCGTAAACCTAACATTTCTCTTGGTTCCTTCCTGCACAGTGCTGCAGCAACAGCAGACTACTATCAGactgaactgaaatgtttaCTAGCATTTCCAGTTTGTAATGGTACTAGTGACGTCTGTTAATAGGTGGTGATGATTAGTCTCTGATTAAAAAGGGTTCCATTTTCTTACTCAAAGGAAAGGCTTTCTTAcatcttgtttttattccacACTAAGGAGCCATGTAAATCTAGATTTATTTGACTGTTCAGTTCTGCTGcttgtagtatttatttatttttatctattGTTTTATGGATGTGTTGTTCACTTTTTGATGAGCTTAAGAACGTAATTAACTCAAATGTAAACCCAGTGGTTGGAAGGTATACAGCGACACCTGCTGCTGTAAATTGCactacacaaaaaaaacaagggatATTAACTATGTACATGGTCTTTTTCAGTGAGCAGTGTCCTATTTTCAATATTGTGGTGGATTGTTTATGTTGGTATATTTAAGCTACATACTGGGCCAATATATATGGAGTTTCTTAATGGTAGACCAGCCTGGACAGGAGAGATTCCATCAAAGCAAAATGCTATGTCTAGCTGTACCAGCCGTCTAAACGAATGTAACTTACACCCCCGTTTTGGTAGCATGTTATCCAATCTGTTAAATCTACAATAAATTATTTCATCTGTATAtgggaaatatttaaatcagtttCAGTGTTGTAACCATTCATATAATCGATGTTCTCTATCTATCTGTGTTTTACTCTGTTTTACtacctgttttttaaattaaactgtaaagaGCAGGTAATTTCctaatttcatttgaaatgtgaatatCTGATCCAGTATAACCATTATTCAAAACCATGGAAGtgtaattgatttttttgtctATTATGGATGTATTCTTTTAATTATAGGAGTGGGTAAACTGGATTAACTGTACCTGAGAACAGACAGAACTGAATAAACTAATACAATAACAGACagcttttctttatatttagtGCTAAGAGAGgttcatgttaaaaaataaaggggGGGGGCATGAAAGAGATACTTAGACATATGCAACTGACATTAAAGAGAGAGACAATTGAGCGCTCTGGGTATCCACTTTCTAACGAGCTCTGAAGCAACAACATAGATCCTCTATCTAAAGTGTTTACGTAGTATAGAACAAGGTTAATTATTGGGAAAGGACAAAGATATACAAACTGTTTCTCATGACGTTTTCTAGTCGGAAATGCTGTTAGAGGAGTGATGATcatcatattaataacaaagtaGAGAGTGTGATTGgttgaacaaaacaatacaataaaactttGGAGTTACTATAAAGCTCTTGCAATAGAACAAGACTGC

Function

GO: NA

KEGG:

id description
K22385 CAMLG; calcium signal-modulating cyclophilin ligand

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011266 True 2393 mRNA 0.44 3 16000144 16004390

Neighbor

gene id symbol gene type direction distance location
AMCG00011265 ddx46,LOC107757870,LOC107571605,LOC107713612 coding downstream 127 15987078 ~ 16000017 (-)
AMCG00011263 cssa04h5orf24 coding downstream 14246 15978697 ~ 15985898 (-)
AMCG00011260 NA coding downstream 23137 15975031 ~ 15977007 (-)
AMCG00011261 NA coding downstream 62687 15802473 ~ 15937457 (-)
AMCG00011248 NA coding downstream 556019 15443190 ~ 15444125 (-)
AMCG00011264 sec24a,LOC102796029 coding upstream 582 16004972 ~ 16024749 (-)
AMCG00011272 ube2al,ube2a,ube2b,LOC105934920,LOC103029486,LOC103021436,LOC104955100 coding upstream 105880 16110270 ~ 16114959 (-)
AMCG00011274 tcf7 coding upstream 145346 16149736 ~ 16177066 (-)
AMCG00011273 NA coding upstream 193730 16198120 ~ 16199539 (-)
AMCG00011279 rapgef6 coding upstream 536267 16540657 ~ 16579592 (-)
G105326 NA non-coding downstream 431020 15535370 ~ 15569124 (-)
G105282 NA non-coding downstream 595911 15385716 ~ 15404233 (-)
G105298 NA non-coding downstream 603752 15391732 ~ 15396392 (-)
G105291 NA non-coding downstream 625381 15373347 ~ 15374763 (-)
G105261 NA non-coding downstream 677432 15298645 ~ 15322712 (-)
G105427 sar1b,LOC106940938,LOC107657201 non-coding upstream 27861 16032251 ~ 16035023 (-)
G105454 zgc:56064,LOC102205414,LOC107684868,LOC107564119 non-coding upstream 134709 16139099 ~ 16141338 (-)
G105473 vdac1,LOC106567523,LOC107557296 non-coding upstream 231738 16236128 ~ 16237685 (-)
G105479 NA non-coding upstream 240306 16244696 ~ 16247301 (-)
G105553 NA non-coding upstream 650857 16655247 ~ 16725153 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other downstream 26272 15963338 ~ 15973872 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other downstream 484469 15499534 ~ 15515675 (-)
G105290 LOC108429417 other downstream 626965 15370402 ~ 15373179 (-)
G105050 NA other downstream 1931583 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 2003555 13993983 ~ 13996589 (-)
AMCG00011271 LOC107562913 other upstream 38981 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 939542 16943932 ~ 16961069 (-)
AMCG00011313 NA other upstream 1713236 17717626 ~ 17751099 (-)
G105770 NA other upstream 1746863 17751253 ~ 17751502 (-)
G105793 NA other upstream 1995278 17999668 ~ 18000445 (-)

Expression


Co-expression Network