G105261


Basic Information

Item Value
gene id G105261
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15298645 ~ 15322712 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131651
CTTTACACTTTACTGttgaaaacagtttaatttttcattcaaaagaaaagctgtacattttaccttttaaaGAACGACCtacaaaacaaaccttttatACACAGTGGTTTAGACTAATTCACCTCAACTGTAATTTCCCTCACACTTGCAGAACACGATGGATGCTGAAATTGTTATTATAAAGCATCAGAACAGCCCACAGGCCAAAAGCAATTaaggtattttatgttttttggcaTGAATGGCATTTCATGTGTGTAGgatttcaataaagaaaagcaagCCCGTTCGAgaagcaatacatttatttgcattccAAACaggtcaaaaaaataaatacactgacaTGGGGTTGTGAATTGAGCTGACCGTCCTGCATTTCACTGGTCGTTCTCATAGTCGGCAGGGTTCTTCCTCTTGCCTTGCTCGTAGACATGGTTTCCCCAGGTGTAGGTCAAATACATGATCACGAAAGAGGTGCCACTTTAAAGACTTGTGAGCTGAAGCGCCTCCACACGTTGGGTATCCCCTTGGAGAAGTAGTTGGCGAAGGCTTTCTGCTCGAAGGGGGACAGGTGGTAGGTGATCACATGCCTGACCTTGGCCAGGTCTCCAAAGTGGTGGCCCATCGTCTCAAAAGGGGTGCAGGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131651 True 651 lncRNA 0.43 3 15298645 15322712

Neighbor

gene id symbol gene type direction distance location
AMCG00011245 NA coding downstream 3140 15282577 ~ 15295505 (-)
AMCG00011237 sept8,LOC103475354 coding downstream 26017 15247192 ~ 15272628 (-)
AMCG00011238 NA coding downstream 59920 15235625 ~ 15238725 (-)
AMCG00011239 NA coding downstream 168602 15080384 ~ 15130043 (-)
AMCG00011233 gabrb2l,LOC106567507,LOC105011225,LOC107661674,LOC107578857 coding downstream 408340 14884434 ~ 14890305 (-)
AMCG00011246 NA coding upstream 5624 15328336 ~ 15346964 (-)
AMCG00011244 NA coding upstream 38604 15361316 ~ 15364890 (-)
AMCG00011248 NA coding upstream 120478 15443190 ~ 15444125 (-)
AMCG00011261 NA coding upstream 479761 15802473 ~ 15937457 (-)
AMCG00011260 NA coding upstream 652319 15975031 ~ 15977007 (-)
G105221 NA non-coding downstream 179212 15119207 ~ 15119433 (-)
G105213 NA non-coding downstream 243828 15054416 ~ 15054817 (-)
G105187 NA non-coding downstream 369596 14928801 ~ 14929049 (-)
G105176 NA non-coding downstream 409208 14889226 ~ 14889437 (-)
G105112 NA non-coding downstream 848864 14447338 ~ 14449781 (-)
G105291 NA non-coding upstream 50635 15373347 ~ 15374763 (-)
G105282 NA non-coding upstream 63004 15385716 ~ 15404233 (-)
G105298 NA non-coding upstream 69020 15391732 ~ 15396392 (-)
G105326 NA non-coding upstream 212658 15535370 ~ 15569124 (-)
G105427 sar1b,LOC106940938,LOC107657201 non-coding upstream 709539 16032251 ~ 16035023 (-)
G105050 NA other downstream 1230084 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 1302056 13993983 ~ 13996589 (-)
G104929 NA other downstream 1619383 13665795 ~ 13679262 (-)
G104909 NA other downstream 1931571 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 2342378 12942390 ~ 12956267 (-)
G105290 LOC108429417 other upstream 47690 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 176822 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 640626 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 720659 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 1621220 16943932 ~ 16961069 (-)

Expression


Co-expression Network