AMCG00011238


Basic Information

Item Value
gene id AMCG00011238
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15235625 ~ 15238725 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011238
TCCAGATAAAGATGATTGACACCGCAGTGGGATCAGAAGCCTTACCTTTCCATGTCCAGTTGAAGACTCTTCTGGACCAGGAGTCCAGATACCAGCCCAAGCTGTGTGGGTTGAGGATCATCGAGGCCGCTCACGACAATGGCCTGAGGATGACCACGAGTCTGAGGGACTTTGAAGTGAGGGATCTGTTATCTTTGTCCCGGTTCTTCGGCTTCAGCGCGGAGACCTTCTCTCTGGCAGTCCAGCCAAAGCACCTGTCCTGCGTGGGCCTGTGCTGTTTCTACATCGCTGTGAAATCGGCAGAAGACGAGCGCAACGTTCCCTTGGCCACAGATTTAATCCGGATCAGTCAGCACCGGTTCACGGTCTCGGACATGATGAGGATGGAGAAGATCATCCTGGAGAAGCTCTACTGGAAGGTGAAAGCCACCACGGCCCTACATTTCCTCAGGCTCTATCATGTGCACATCGTTGAGCAGTTGGCCACAGAGAGAAAGTGGCTGAACGTGGATCGACTGGAAGCCCAGCTGAAAGCGTGTCATTGCTCTTTCGCCTTCTCCAAAATAAAGCCCTCTCTTCTTGCTCTGGCTATAATTGCCTTAGAAATCCAAGAGCAAAGCCTTCATGAAGTGACTGAAGTGCTGCAGGATCTACAACAGCATTGCAATATCAAAGAGGGGGACTTGATCTGTGCGAGAGAGCTGGTGGCAAAATGCCTGGCTGAGTATTCCTCGACGAAGTGTACCAAGCCAAATAACCAGAAACTGAGATGGATTGTGTCGGGAAGGACTGCAAGACAGCTGAAGCATAGCTACTATAGGATCACTCATCTTCCAACGATTCCTGAAGCTGCTTAT

Function

GO: NA

KEGG:

id description
K10145 CCNG1; cyclin G1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011238 True 857 mRNA 0.51 6 15235625 15238725

Neighbor

gene id symbol gene type direction distance location
AMCG00011239 NA coding downstream 105582 15080384 ~ 15130043 (-)
AMCG00011233 gabrb2l,LOC106567507,LOC105011225,LOC107661674,LOC107578857 coding downstream 345320 14884434 ~ 14890305 (-)
AMCG00011232 LOC103038806,LOC108413784,LOC107661674,LOC105011225,LOC106567507 coding downstream 401983 14823524 ~ 14833642 (-)
AMCG00011229 NA coding downstream 534196 14688179 ~ 14701429 (-)
AMCG00011231 NA coding downstream 559201 14649378 ~ 14676424 (-)
AMCG00011237 sept8,LOC103475354 coding upstream 8467 15247192 ~ 15272628 (-)
AMCG00011245 NA coding upstream 43852 15282577 ~ 15295505 (-)
AMCG00011246 NA coding upstream 89611 15328336 ~ 15346964 (-)
AMCG00011244 NA coding upstream 122591 15361316 ~ 15364890 (-)
AMCG00011248 NA coding upstream 204465 15443190 ~ 15444125 (-)
G105221 NA non-coding downstream 116192 15119207 ~ 15119433 (-)
G105213 NA non-coding downstream 180808 15054416 ~ 15054817 (-)
G105187 NA non-coding downstream 306576 14928801 ~ 14929049 (-)
G105176 NA non-coding downstream 346188 14889226 ~ 14889437 (-)
G105112 NA non-coding downstream 785844 14447338 ~ 14449781 (-)
G105261 NA non-coding upstream 59920 15298645 ~ 15322712 (-)
G105291 NA non-coding upstream 134622 15373347 ~ 15374763 (-)
G105282 NA non-coding upstream 146991 15385716 ~ 15404233 (-)
G105298 NA non-coding upstream 153007 15391732 ~ 15396392 (-)
G105326 NA non-coding upstream 296645 15535370 ~ 15569124 (-)
G105050 NA other downstream 1167064 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 1239036 13993983 ~ 13996589 (-)
G104929 NA other downstream 1556363 13665795 ~ 13679262 (-)
G104909 NA other downstream 1868551 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 2279358 12942390 ~ 12956267 (-)
G105290 LOC108429417 other upstream 131677 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 260809 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 724613 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 804646 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 1705207 16943932 ~ 16961069 (-)

Expression


Co-expression Network