G105221


Basic Information

Item Value
gene id G105221
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 15119207 ~ 15119433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131604
gtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccatgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaagacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagtccaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131604 True 227 lncRNA 0.47 1 15119207 15119433

Neighbor

gene id symbol gene type direction distance location
AMCG00011233 gabrb2l,LOC106567507,LOC105011225,LOC107661674,LOC107578857 coding downstream 228902 14884434 ~ 14890305 (-)
AMCG00011232 LOC103038806,LOC108413784,LOC107661674,LOC105011225,LOC106567507 coding downstream 285565 14823524 ~ 14833642 (-)
AMCG00011229 NA coding downstream 417778 14688179 ~ 14701429 (-)
AMCG00011231 NA coding downstream 442783 14649378 ~ 14676424 (-)
AMCG00011230 NA coding downstream 543179 14546071 ~ 14576028 (-)
AMCG00011238 NA coding upstream 116192 15235625 ~ 15238725 (-)
AMCG00011237 sept8,LOC103475354 coding upstream 127759 15247192 ~ 15272628 (-)
AMCG00011245 NA coding upstream 163144 15282577 ~ 15295505 (-)
AMCG00011246 NA coding upstream 208903 15328336 ~ 15346964 (-)
AMCG00011244 NA coding upstream 241883 15361316 ~ 15364890 (-)
G105213 NA non-coding downstream 64390 15054416 ~ 15054817 (-)
G105187 NA non-coding downstream 190158 14928801 ~ 14929049 (-)
G105176 NA non-coding downstream 229770 14889226 ~ 14889437 (-)
G105112 NA non-coding downstream 669426 14447338 ~ 14449781 (-)
G105107 NA non-coding downstream 684540 14427419 ~ 14434667 (-)
G105249 NA non-coding upstream 114270 15233703 ~ 15300851 (-)
G105261 NA non-coding upstream 179212 15298645 ~ 15322712 (-)
G105291 NA non-coding upstream 253914 15373347 ~ 15374763 (-)
G105282 NA non-coding upstream 266283 15385716 ~ 15404233 (-)
G105298 NA non-coding upstream 272299 15391732 ~ 15396392 (-)
G105050 NA other downstream 1050646 14067215 ~ 14068561 (-)
AMCG00011211 NA other downstream 1122618 13993983 ~ 13996589 (-)
G104929 NA other downstream 1439945 13665795 ~ 13679262 (-)
G104909 NA other downstream 1752133 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 2162940 12942390 ~ 12956267 (-)
G105290 LOC108429417 other upstream 250969 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 380101 15499534 ~ 15515675 (-)
AMCG00011259 pcbd2,LOC107386701,LOC105890513,LOC106941140,LOC103129816 other upstream 843905 15963338 ~ 15973872 (-)
AMCG00011271 LOC107562913 other upstream 923938 16043371 ~ 16098179 (-)
AMCG00011290 rbm27,LOC106567487 other upstream 1824499 16943932 ~ 16961069 (-)

Expression


Co-expression Network