G104921


Basic Information

Item Value
gene id G104921
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 13553440 ~ 13555074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU131214
TCACAGACAAGAAgtaactttaattaaatattgtgaaaGTTGAAAAGTTATTATACAGCTCAAAGTTCATCAAAAATGATAACAATCTAtacagtagttttttttcttttccctattAATACAACTGTTCAGTGTGTGTCTAGTCAAAGAAGGATTCTGAAAAAAGAAGGAAGGGAAAACCAGCTTTGTCGtttgtttgtcagtttgtttttctctcagaCTTTATTGTCTGCAAATCTGCATGACAAAATTATATCTCGCTTACAATTAAGTCATTACAAGGTAACCtgaatctttttaaaattattattggtaaaaacaaaacagaaacaaaatcaaaccccagaaacattaatattgttaaaCAAGTGCCTACAACAGAGGAGCTCAAAAACCCTCCCCTTAGTAAAAGTCCCTTAGATGATAACTgatgttcttaaaaaaataatcctacacgagaaaaactgaaaagccATATTCTCCTCAGAATACAGAATCTCTATCTAAAATACAGTGCATGTGTTCACCAAAATGACAGGGTGCAGGTGGACTCAGGTGAGGGACATACAGTTACTCTCCCTCAAACAGAGAGGGACGCAACTGCGATTTTCTGTGATACAATGAAAGGGCTCTCAATGCAGGGGATtgtgggaagagagagagagagacagagagagagacagagagagagagagagagagagggggcattTCACACAGATGTATGTAATTATACTATAGTGTTATCAGTTGTAGCGATGTTAGGAATTTGCAGACagttataaatgtgtaattactcTGTAGTCATAAGCATGGCTACAGTCTGGGCATTACTGCAGTGTTGACATGCAGTAACTACACAAGTTAGTATTAAGAGGTGTGTAAATCCTTCGCTTGCTTTAAGGGACTGTTCATATTCTGCGAGTGACCATGTGGCGGAACACAGactcctaacaaaaacaaagcaacaaaaaaaaaagacatggcttttatttttctctctttcttaaaCCGCCACTAACAGAAAAAAAgggaacagaaaaacagatgaaATAACAGGTTTCACTTTAACTTAAAAATACAGCgcaccctcccccccccacctacCCACTCGcaacacacattaaatattaatcacCTCAAAAGTCGGCCTTTCCACTTACTCCCCCACAACCCCCAATGAAAAAAATGCCAGCGCTTCGACAAGATCGTAAAAATGCTGAGTTCCAAGTATGAAGACTCAGAAAACAGATTCACATCAAGGTAACAAAAAAAGttcattttgtgctttttttttaaatataaaaaaactccTAACggtttctggttttgttttaaatactctGTGATGACAGACAACCCTGGTGAAGATTACAACATACATGTGAAAGAATGGGTATGATTTTGCATTATTAAGGCATCCAATCTGCTGGTTCAAATGtcagtgaaagagaaaataagaaacaaacagaagagaGATACAGCAGgcataaagaaagaaacaaagaccaaagaaagaaacaaagaaagtattttcatatttttccccccaaaatggTCTTCCTATTTTCAATGCACAAAATGCAACCATCACTCCCACAGGAAGAGATCCCATGCATACTATTAGTTTAAAACA

Function

NR:

description
PREDICTED: S-antigen protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131214 True 1635 lncRNA 0.37 1 13553440 13555074

Neighbor

gene id symbol gene type direction distance location
AMCG00011188 ublcp1,LOC106567438,LOC106603889,LOC107672805 coding downstream 209976 13328493 ~ 13343464 (-)
AMCG00011183 NA coding downstream 361300 13186948 ~ 13192140 (-)
AMCG00011182 NA coding downstream 448885 13056733 ~ 13104555 (-)
AMCG00011179 NA coding downstream 519321 13019906 ~ 13034119 (-)
AMCG00011180 NA coding downstream 540089 13004538 ~ 13013351 (-)
AMCG00011194 NA coding upstream 129560 13684634 ~ 13687704 (-)
AMCG00011200 NA coding upstream 188844 13743918 ~ 13745225 (-)
AMCG00011198 LOC105011263,LOC107750325,LOC107677389,LOC107587064 coding upstream 197479 13752553 ~ 13778757 (-)
AMCG00011203 NA coding upstream 301783 13856857 ~ 13858270 (-)
AMCG00011208 NA coding upstream 364594 13919668 ~ 13922667 (-)
G104916 NA non-coding downstream 175141 13378057 ~ 13378299 (-)
G104915 NA non-coding downstream 176443 13376133 ~ 13376997 (-)
G104846 NA non-coding downstream 613280 12935482 ~ 12940160 (-)
G104845 NA non-coding downstream 622357 12928672 ~ 12931083 (-)
G104776 NA non-coding downstream 789773 12761045 ~ 12763667 (-)
G104928 clint1a,LOC108441628 non-coding upstream 107112 13662186 ~ 13667716 (-)
G104998 rpl26l1,rl26,LOC105024418,LOC107381811,LOC100708525,LOC103144500 non-coding upstream 309447 13864521 ~ 13867615 (-)
G105048 NA non-coding upstream 510267 14065341 ~ 14065908 (-)
G105052 NA non-coding upstream 515330 14070404 ~ 14070969 (-)
G105077 LOC106567452,LOC106603868,LOC105011253 non-coding upstream 643753 14198827 ~ 14203536 (-)
G104909 NA other downstream 186366 13365083 ~ 13367074 (-)
AMCG00011174 slc23a1,pwwp2a,LOC106603911,LOC102781148 other downstream 597173 12942390 ~ 12956267 (-)
AMCG00011169 NA other downstream 726560 12821025 ~ 12826880 (-)
G104749 NA other downstream 913213 12634856 ~ 12640227 (-)
G104715 NA other downstream 1004447 12548289 ~ 12548993 (-)
G104929 NA other upstream 110721 13665795 ~ 13679262 (-)
AMCG00011211 NA other upstream 438909 13993983 ~ 13996589 (-)
G105050 NA other upstream 512141 14067215 ~ 14068561 (-)
G105290 LOC108429417 other upstream 1815328 15370402 ~ 15373179 (-)
AMCG00011251 gfpt2,LOC106611946,LOC105024910,LOC108240504,LOC107375897 other upstream 1944460 15499534 ~ 15515675 (-)

Expression


Co-expression Network