AMCG00012366


Basic Information

Item Value
gene id AMCG00012366
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 16977572 ~ 16984994 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012366
ATGTTCGGTCAGAAAAATGCAAGACCTGCTGACGTCAGGTCCAGCTGGGCTTTAAGCACAGAGATGAAAGGAAAAGGGAGTCCAGGGTATCTTCTAATCCGGCTGGGGGTCTGGGCAGCCCTCCTTGCCATCGGGTGCCAAGGGGCGATCCAGACACCTGATTATGACGACACCAGCAGTCCCCAGTTCCTTAATCCCTCCTGGATGGCGGGCATCCCTGACGAGCGCCCACTCTCGGAGGTGAACCTACCCGGCACCCACAACAGCATGGCGTTTTATGGGGGGGCGCTCACGGAGTGCCAGTCCTGGCCGCTGTCCCTTCAGCTCCGAGCGGGCGTCCGCTTCCTGGACGTGCGGGTCCGCCACGTGCGGGGCAATCTCACCATCCACCACGGGATTGTGTACCAGCGGGCGCACTTCGGCACGGTCCTGGAGGAGGTCACCCGCTTCCTCCGGGAGAGGCCCACGGAGACCGTGCTCATGAGGGTGAAGGAGGAGTTCAGCGAGACGCACGCCCTCTACGACGCCGTGGTCAGCTACATCCGTGCATACGGGGACTGGGACCTACTGTGGCACAGCAGGGACACCCCCACCATGGGCCAGGCTCGCGGCAAACTCATCATCCTGCAGAACTTCTCCGGCCCCCACCTCGGGATGTCCTATGGCGCCATGGACATAGCGGACGAGTGGAAGGTGCCCACTCTCTTGCACATTCCCACCAAGTGGCAGAGCGTCTACGAGCACCTGGATGCTGCCATGGCAGGTGATTGCGGGCGCCTCTTCCTCACTTACGCCAGCGGGGCGGGCGTCTTTGCTTACCCCAACGCCGTAGCCCAGCGCATCAACTCCTGGCTCTACCAGCACCTGGCCACCCTCGCGGGGCAGAAACTCCGGGTGGGAATGGTGGTCATGGACTTCCCGGGAGCTCCCCTCTTGAAGATGATCATCGATTTAAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012366 True 960 mRNA 0.62 3 16977572 16984994

Neighbor

gene id symbol gene type direction distance location
AMCG00012360 NA coding upstream 77137 16877377 ~ 16900435 (+)
AMCG00012354 mex3a,mex3b,LOC107756899,LOC107671389,LOC107671388 coding upstream 159133 16812785 ~ 16818439 (+)
AMCG00012350 NA coding upstream 261597 16713346 ~ 16715975 (+)
AMCG00012347 NA coding upstream 306873 16650333 ~ 16670699 (+)
AMCG00012343 aldoab,aldoaa,LOC107581735,LOC103381979,LOC107689930 coding upstream 440327 16530753 ~ 16537245 (+)
AMCG00012369 NA coding downstream 8485 16993479 ~ 16997064 (+)
AMCG00012367 NA coding downstream 37665 17022659 ~ 17029088 (+)
AMCG00012370 NA coding downstream 57201 17042195 ~ 17051046 (+)
AMCG00012368 NA coding downstream 71536 17056530 ~ 17063053 (+)
AMCG00012375 NA coding downstream 147568 17132562 ~ 17133006 (+)
G136297 NA non-coding upstream 20277 16956689 ~ 16957295 (+)
G136286 NA non-coding upstream 62877 16912235 ~ 16914695 (+)
G136237 NA non-coding upstream 70467 16842567 ~ 16907105 (+)
G136236 NA non-coding upstream 145770 16829050 ~ 16831802 (+)
G136195 NA non-coding upstream 345308 16620255 ~ 16632264 (+)
G136351 NA non-coding downstream 179982 17164976 ~ 17172106 (+)
G136436 NA non-coding downstream 305151 17290145 ~ 17290529 (+)
G136444 NA non-coding downstream 315533 17300527 ~ 17304999 (+)
G136457 NA non-coding downstream 345800 17330794 ~ 17332570 (+)
G136458 NA non-coding downstream 354584 17339578 ~ 17340736 (+)
G136258 NA other upstream 101972 16871838 ~ 16875600 (+)
G136255 NA other upstream 110124 16866537 ~ 16867448 (+)
G136245 NA other upstream 113979 16811706 ~ 16863593 (+)
AMCG00012351 NA other upstream 212464 16733426 ~ 16765108 (+)
AMCG00012349 LOC106588560,LOC106570198 other upstream 271379 16674279 ~ 16706193 (+)
AMCG00012374 NA other downstream 141019 17126013 ~ 17129339 (+)
G136341 NA other downstream 142161 17127155 ~ 17264404 (+)
AMCG00012387 NA other downstream 399942 17384936 ~ 17388799 (+)
G136489 NA other downstream 426767 17411761 ~ 17476097 (+)
G136499 NA other downstream 474490 17459484 ~ 17466059 (+)

Expression


Co-expression Network