G132480


Basic Information

Item Value
gene id G132480
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3753947 ~ 3785196 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166132
TGCAGCAGACTTAagatccatttttattttagaaaaacaactcATTCATGCAATTCATGTGAAATCTACAAATTCAGTAACAATTCAAAttagaatacaaaaaataatcaaatataaacaCTATAAGAGTGATCAGTCACATTTTAACAACactgttaaaaaatgaaacctaACAGTTAACAATCATTTACATCAGAACACAGTAAACTGGTAAATCTCAGTCAACAAGTCATCCTGAGTAAGGAtgctgcaaataataataaagtaacaaTAACTGCATCAGTATTGCACTNTAgtaatgtacttaatgtgtggTACAGATTAGTGCCGTTCACTGCTGGAGAATGGAGTCAGACACAGAACTGTGTGAATTTCCAGACAAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166132 True 386 lncRNA 0.32 2 3753947 3785196

Neighbor

gene id symbol gene type direction distance location
AMCG00011759 NA coding upstream 86398 3661364 ~ 3667549 (+)
AMCG00011755 NA coding upstream 262392 3484762 ~ 3491555 (+)
AMCG00011754 NA coding upstream 305113 3448466 ~ 3448834 (+)
AMCG00011750 NA coding upstream 306100 3440089 ~ 3447847 (+)
AMCG00011749 NA coding upstream 341803 3409473 ~ 3412144 (+)
AMCG00011762 NA coding downstream 70213 3855409 ~ 3869281 (+)
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding downstream 97429 3882625 ~ 3889058 (+)
AMCG00011769 NA coding downstream 126704 3911900 ~ 3914902 (+)
AMCG00011774 NA coding downstream 134473 3919669 ~ 3922626 (+)
AMCG00011776 NA coding downstream 162206 3947402 ~ 3965183 (+)
G132468 NA non-coding upstream 40249 3693505 ~ 3713698 (+)
G132466 NA non-coding upstream 81510 3669681 ~ 3672437 (+)
G132433 NA non-coding upstream 185507 3567887 ~ 3568440 (+)
G132270 NA non-coding upstream 503840 3169738 ~ 3250107 (+)
G132293 NA non-coding upstream 508095 3238486 ~ 3245852 (+)
G132506 NA non-coding downstream 3031 3788227 ~ 3788440 (+)
G132508 NA non-coding downstream 7033 3792229 ~ 3792501 (+)
G132510 NA non-coding downstream 15115 3800311 ~ 3822313 (+)
G132518 NA non-coding downstream 56036 3841232 ~ 3841474 (+)
G132573 NA non-coding downstream 205231 3990427 ~ 3995729 (+)
G132271 NA other upstream 549350 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 652810 3078417 ~ 3101137 (+)
G132221 NA other upstream 749285 3001432 ~ 3004662 (+)
G132072 NA other upstream 812776 2938370 ~ 2941171 (+)
G132058 NA other upstream 873687 2877274 ~ 2880260 (+)
AMCG00011770 NA other downstream 107185 3892381 ~ 3897596 (+)
AMCG00011771 NA other downstream 118479 3903675 ~ 3977662 (+)
AMCG00011806 NA other downstream 1329894 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1974662 5759858 ~ 5761248 (+)
G133059 NA other downstream 2043605 5828801 ~ 5829532 (+)

Expression


Co-expression Network