G132734


Basic Information

Item Value
gene id G132734
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 4775154 ~ 4775539 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166429
ttcctgtttcagcatgacaacccgtGCACAAAGTTAGGTCCATACAGCAATAGTTTGTCAAGAttttggtgtggaagaacttgactggcctgcacagagccttgacctcaaccccatcccaccaTGGAAAAgctgactgtgagccaggcctgatcacCCAATATCAgagcccgacctcactaatgcactaatcccctcaacaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttattgcatcaaagggggaccaactccatattaatgcccatgattttggattagatgtttgacgagcaggtgtccacatacttttggcaatgtagtgtatgtactttgaccccctgtccagtattttttgAAGTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166429 True 386 lncRNA 0.46 1 4775154 4775539

Neighbor

gene id symbol gene type direction distance location
AMCG00011795 NA coding upstream 53233 4719814 ~ 4721921 (+)
AMCG00011796 nlgn2,LOC107750775,LOC107564776,LOC107664280,LOC107659731 coding upstream 77813 4683676 ~ 4697341 (+)
AMCG00011794 NA coding upstream 126739 4646310 ~ 4648415 (+)
AMCG00011793 LOC105024602,LOC106563375,LOC105902387,LOC107564776 coding upstream 173801 4593960 ~ 4601353 (+)
AMCG00011785 NA coding upstream 525737 4243172 ~ 4249417 (+)
AMCG00011801 NA coding downstream 12776 4788315 ~ 4804985 (+)
AMCG00011803 NA coding downstream 52895 4828434 ~ 4831225 (+)
AMCG00011804 NA coding downstream 101396 4876935 ~ 4881034 (+)
AMCG00011805 NA coding downstream 189122 4964661 ~ 4967697 (+)
AMCG00011807 NA coding downstream 387691 5163230 ~ 5165552 (+)
G132726 NA non-coding upstream 11266 4763689 ~ 4763888 (+)
G132722 NA non-coding upstream 22231 4752722 ~ 4752923 (+)
G132660 LOC105020582,LOC108229068,LOC104920020,LOC106608724 non-coding upstream 452864 4259544 ~ 4322290 (+)
G132655 NA non-coding upstream 556171 4218547 ~ 4218983 (+)
G132596 NA non-coding upstream 663224 4109513 ~ 4111930 (+)
G132755 NA non-coding downstream 71993 4847532 ~ 4847740 (+)
G132758 NA non-coding downstream 75067 4850606 ~ 4851041 (+)
G132781 NA non-coding downstream 226855 5002394 ~ 5002721 (+)
G132817 NA non-coding downstream 241771 5017310 ~ 5017540 (+)
G132818 NA non-coding downstream 243462 5019001 ~ 5019388 (+)
AMCG00011771 NA other upstream 797492 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 877558 3892381 ~ 3897596 (+)
G132271 NA other upstream 1570557 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 1674017 3078417 ~ 3101137 (+)
G132221 NA other upstream 1770492 3001432 ~ 3004662 (+)
AMCG00011806 NA other downstream 339551 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 984319 5759858 ~ 5761248 (+)
G133059 NA other downstream 1053262 5828801 ~ 5829532 (+)
AMCG00011837 NA other downstream 1111378 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 1117985 5893524 ~ 5907174 (+)

Expression


Co-expression Network